Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.58■□□□□ 0.08
MMP13P45452 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.58■□□□□ 0.08
MMP13P45452 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.58■□□□□ 0.08
MMP13P45452 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.58■□□□□ 0.08
MMP13P45452 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
MMP13P45452 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.58■□□□□ 0.08
MMP13P45452 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.58■□□□□ 0.08
MMP13P45452 AC005252.2-201ENST00000624630 1141 ntBASIC15.58■□□□□ 0.08
MMP13P45452 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
MMP13P45452 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
MMP13P45452 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
MMP13P45452 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP13P45452 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.57■□□□□ 0.08
MMP13P45452 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
MMP13P45452 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP13P45452 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
MMP13P45452 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.57■□□□□ 0.08
MMP13P45452 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP13P45452 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.57■□□□□ 0.08
MMP13P45452 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP13P45452 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
MMP13P45452 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.57■□□□□ 0.08
MMP13P45452 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
MMP13P45452 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.57■□□□□ 0.08
MMP13P45452 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.57■□□□□ 0.08
MMP13P45452 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.57■□□□□ 0.08
MMP13P45452 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
MMP13P45452 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP13P45452 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
MMP13P45452 AL360270.3-201ENST00000609118 1348 ntBASIC15.57■□□□□ 0.08
MMP13P45452 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
MMP13P45452 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.57■□□□□ 0.08
MMP13P45452 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP13P45452 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP13P45452 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP13P45452 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP13P45452 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP13P45452 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
MMP13P45452 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
MMP13P45452 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP13P45452 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.56■□□□□ 0.08
MMP13P45452 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
MMP13P45452 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
MMP13P45452 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP13P45452 RN7SL752P-201ENST00000463779 287 ntBASIC15.56■□□□□ 0.08
MMP13P45452 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.56■□□□□ 0.08
MMP13P45452 AP005018.1-201ENST00000525475 301 ntBASIC15.56■□□□□ 0.08
MMP13P45452 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
MMP13P45452 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.56■□□□□ 0.08
MMP13P45452 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
MMP13P45452 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
MMP13P45452 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
MMP13P45452 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.56■□□□□ 0.08
MMP13P45452 CLUHP6-201ENST00000580789 941 ntBASIC15.56■□□□□ 0.08
MMP13P45452 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.56■□□□□ 0.08
MMP13P45452 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP13P45452 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP13P45452 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.56■□□□□ 0.08
MMP13P45452 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms