Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT20P35900 HSPA7-201ENST00000445535 1927 ntBASIC14.31□□□□□ -0.12
KRT20P35900 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.31□□□□□ -0.12
KRT20P35900 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT20P35900 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KRT20P35900 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT20P35900 PEG13-201ENST00000631594 5667 ntBASIC14.31□□□□□ -0.12
KRT20P35900 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KRT20P35900 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT20P35900 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KRT20P35900 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
KRT20P35900 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT20P35900 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.31□□□□□ -0.12
KRT20P35900 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
KRT20P35900 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT20P35900 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.31□□□□□ -0.12
KRT20P35900 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.31□□□□□ -0.12
KRT20P35900 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.31□□□□□ -0.12
KRT20P35900 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.31□□□□□ -0.12
KRT20P35900 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.31□□□□□ -0.12
KRT20P35900 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT20P35900 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KRT20P35900 AL049840.4-201ENST00000602422 811 ntBASIC14.31□□□□□ -0.12
KRT20P35900 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT20P35900 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
KRT20P35900 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT20P35900 WASH3P-207ENST00000560956 1394 ntBASIC14.31□□□□□ -0.12
KRT20P35900 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
KRT20P35900 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
KRT20P35900 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT20P35900 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 AC097359.2-201ENST00000604992 2389 ntBASIC14.3□□□□□ -0.12
KRT20P35900 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 MIR661-201ENST00000384842 89 ntBASIC14.3□□□□□ -0.12
KRT20P35900 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 AC134915.1-201ENST00000426461 574 ntBASIC14.3□□□□□ -0.12
KRT20P35900 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.3□□□□□ -0.12
KRT20P35900 MYCLP2-201ENST00000449268 967 ntBASIC14.3□□□□□ -0.12
KRT20P35900 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.3□□□□□ -0.12
KRT20P35900 AC190387.1-201ENST00000551683 408 ntBASIC14.3□□□□□ -0.12
KRT20P35900 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.3□□□□□ -0.12
KRT20P35900 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.3□□□□□ -0.12
KRT20P35900 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 AL391069.4-201ENST00000609583 481 ntBASIC14.3□□□□□ -0.12
KRT20P35900 AC004790.1-201ENST00000612686 536 ntBASIC14.3□□□□□ -0.12
KRT20P35900 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.3□□□□□ -0.12
KRT20P35900 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.3□□□□□ -0.12
KRT20P35900 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
KRT20P35900 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
KRT20P35900 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
KRT20P35900 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
KRT20P35900 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT20P35900 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
KRT20P35900 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
KRT20P35900 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KRT20P35900 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT20P35900 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms