Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC20.47■□□□□ 0.87
CPS1P31327 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC20.47■□□□□ 0.87
CPS1P31327 RN7SL288P-201ENST00000490496 291 ntBASIC20.47■□□□□ 0.87
CPS1P31327 AC113347.2-201ENST00000512350 279 ntBASIC20.47■□□□□ 0.87
CPS1P31327 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPS1P31327 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC20.47■□□□□ 0.87
CPS1P31327 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPS1P31327 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPS1P31327 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC20.47■□□□□ 0.87
CPS1P31327 RN7SL121P-201ENST00000584223 273 ntBASIC20.47■□□□□ 0.87
CPS1P31327 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPS1P31327 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPS1P31327 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPS1P31327 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CPS1P31327 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.46■□□□□ 0.87
CPS1P31327 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CPS1P31327 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CPS1P31327 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPS1P31327 CCL25-202ENST00000315626 450 ntTSL 2 BASIC20.46■□□□□ 0.87
CPS1P31327 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPS1P31327 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC20.46■□□□□ 0.87
CPS1P31327 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPS1P31327 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPS1P31327 KRT8P30-201ENST00000432100 650 ntBASIC20.46■□□□□ 0.87
CPS1P31327 AC084262.1-201ENST00000567818 751 ntBASIC20.46■□□□□ 0.87
CPS1P31327 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPS1P31327 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC20.46■□□□□ 0.87
CPS1P31327 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPS1P31327 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPS1P31327 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPS1P31327 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPS1P31327 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC20.46■□□□□ 0.87
CPS1P31327 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CPS1P31327 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CPS1P31327 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CPS1P31327 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPS1P31327 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPS1P31327 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPS1P31327 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC20.45■□□□□ 0.86
CPS1P31327 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPS1P31327 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPS1P31327 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC20.45■□□□□ 0.86
CPS1P31327 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPS1P31327 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CPS1P31327 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC20.45■□□□□ 0.86
CPS1P31327 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC20.45■□□□□ 0.86
CPS1P31327 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC20.45■□□□□ 0.86
CPS1P31327 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC20.45■□□□□ 0.86
CPS1P31327 SOD2-205ENST00000444946 917 ntTSL 2 BASIC20.45■□□□□ 0.86
CPS1P31327 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CPS1P31327 RPS23-207ENST00000511844 530 ntTSL 2 BASIC20.45■□□□□ 0.86
CPS1P31327 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC20.45■□□□□ 0.86
CPS1P31327 AC023968.2-201ENST00000560593 1049 ntBASIC20.45■□□□□ 0.86
CPS1P31327 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC20.45■□□□□ 0.86
CPS1P31327 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC20.45■□□□□ 0.86
CPS1P31327 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPS1P31327 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CPS1P31327 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPS1P31327 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPS1P31327 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPS1P31327 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CPS1P31327 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC20.45■□□□□ 0.86
CPS1P31327 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPS1P31327 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC20.45■□□□□ 0.86
CPS1P31327 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPS1P31327 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC20.44■□□□□ 0.86
CPS1P31327 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPS1P31327 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPS1P31327 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPS1P31327 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC20.44■□□□□ 0.86
CPS1P31327 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CPS1P31327 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPS1P31327 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC20.44■□□□□ 0.86
CPS1P31327 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
CPS1P31327 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CPS1P31327 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPS1P31327 DKKL1P1-201ENST00000400550 698 ntBASIC20.44■□□□□ 0.86
CPS1P31327 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC20.44■□□□□ 0.86
CPS1P31327 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC20.44■□□□□ 0.86
CPS1P31327 RN7SL564P-201ENST00000496309 250 ntBASIC20.44■□□□□ 0.86
CPS1P31327 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC20.44■□□□□ 0.86
CPS1P31327 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CPS1P31327 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC20.44■□□□□ 0.86
CPS1P31327 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC20.44■□□□□ 0.86
CPS1P31327 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.44■□□□□ 0.86
CPS1P31327 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CPS1P31327 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC20.44■□□□□ 0.86
CPS1P31327 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPS1P31327 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPS1P31327 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC20.44■□□□□ 0.86
CPS1P31327 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC20.44■□□□□ 0.86
CPS1P31327 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPS1P31327 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPS1P31327 HLF-202ENST00000430986 1385 ntTSL 2 BASIC20.44■□□□□ 0.86
CPS1P31327 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.44■□□□□ 0.86
CPS1P31327 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPS1P31327 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.44■□□□□ 0.86
CPS1P31327 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC20.43■□□□□ 0.86
CPS1P31327 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPS1P31327 API5-203ENST00000455725 2257 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms