Protein–RNA interactions for Protein: P30084

ECHS1, Enoyl-CoA hydratase, mitochondrial, humanhuman

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHS1P30084 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ECHS1P30084 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.26■□□□□ 0.03
ECHS1P30084 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ECHS1P30084 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.26■□□□□ 0.03
ECHS1P30084 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ECHS1P30084 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ECHS1P30084 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ECHS1P30084 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ECHS1P30084 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ECHS1P30084 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ECHS1P30084 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.26■□□□□ 0.03
ECHS1P30084 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ECHS1P30084 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.26■□□□□ 0.03
ECHS1P30084 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.26■□□□□ 0.03
ECHS1P30084 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ECHS1P30084 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ECHS1P30084 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.26■□□□□ 0.03
ECHS1P30084 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ECHS1P30084 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
ECHS1P30084 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ECHS1P30084 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ECHS1P30084 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ECHS1P30084 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.26■□□□□ 0.03
ECHS1P30084 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ECHS1P30084 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ECHS1P30084 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ECHS1P30084 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC15.25■□□□□ 0.03
ECHS1P30084 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ECHS1P30084 AC007326.2-201ENST00000624224 7579 ntBASIC15.25■□□□□ 0.03
ECHS1P30084 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ECHS1P30084 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ECHS1P30084 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.25■□□□□ 0.03
ECHS1P30084 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.25■□□□□ 0.03
ECHS1P30084 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ECHS1P30084 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.25■□□□□ 0.03
ECHS1P30084 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.25■□□□□ 0.03
ECHS1P30084 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.25■□□□□ 0.03
ECHS1P30084 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.25■□□□□ 0.03
ECHS1P30084 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ECHS1P30084 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.25■□□□□ 0.03
ECHS1P30084 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.25■□□□□ 0.03
ECHS1P30084 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
ECHS1P30084 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.25■□□□□ 0.03
ECHS1P30084 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.25■□□□□ 0.03
ECHS1P30084 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.25■□□□□ 0.03
ECHS1P30084 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ECHS1P30084 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ECHS1P30084 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.25■□□□□ 0.03
ECHS1P30084 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ECHS1P30084 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.25■□□□□ 0.03
ECHS1P30084 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ECHS1P30084 NCLP1-201ENST00000445357 1963 ntBASIC15.25■□□□□ 0.03
ECHS1P30084 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ECHS1P30084 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
ECHS1P30084 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ECHS1P30084 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.25■□□□□ 0.03
ECHS1P30084 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ECHS1P30084 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.25■□□□□ 0.03
ECHS1P30084 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ECHS1P30084 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ECHS1P30084 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ECHS1P30084 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
ECHS1P30084 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ECHS1P30084 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.24■□□□□ 0.03
ECHS1P30084 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHS1P30084 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ECHS1P30084 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.24■□□□□ 0.03
ECHS1P30084 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHS1P30084 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ECHS1P30084 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHS1P30084 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.24■□□□□ 0.03
ECHS1P30084 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHS1P30084 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
ECHS1P30084 SALL4P5-201ENST00000419001 1760 ntBASIC15.24■□□□□ 0.03
ECHS1P30084 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
ECHS1P30084 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ECHS1P30084 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ECHS1P30084 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHS1P30084 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ECHS1P30084 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.24■□□□□ 0.03
ECHS1P30084 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ECHS1P30084 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.24■□□□□ 0.03
ECHS1P30084 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.24■□□□□ 0.03
ECHS1P30084 AC114501.2-201ENST00000439631 535 ntBASIC15.24■□□□□ 0.03
ECHS1P30084 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.24■□□□□ 0.03
ECHS1P30084 AL589987.1-201ENST00000453380 819 ntBASIC15.24■□□□□ 0.03
ECHS1P30084 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.24■□□□□ 0.03
ECHS1P30084 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.24■□□□□ 0.03
ECHS1P30084 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ECHS1P30084 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ECHS1P30084 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.24■□□□□ 0.03
ECHS1P30084 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.24■□□□□ 0.03
ECHS1P30084 AC131206.1-201ENST00000538078 1211 ntBASIC15.24■□□□□ 0.03
ECHS1P30084 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ECHS1P30084 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.24■□□□□ 0.03
ECHS1P30084 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ECHS1P30084 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ECHS1P30084 AL662799.1-202ENST00000614205 422 ntBASIC15.24■□□□□ 0.03
ECHS1P30084 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
ECHS1P30084 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms