Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
VARSP26640 AL023775.1-201ENST00000454907 1746 ntBASIC14.81□□□□□ -0.04
VARSP26640 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.81□□□□□ -0.04
VARSP26640 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
VARSP26640 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.81□□□□□ -0.04
VARSP26640 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
VARSP26640 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.81□□□□□ -0.04
VARSP26640 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
VARSP26640 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
VARSP26640 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.81□□□□□ -0.04
VARSP26640 TTTY23B-201ENST00000442790 549 ntBASIC14.81□□□□□ -0.04
VARSP26640 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.81□□□□□ -0.04
VARSP26640 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.81□□□□□ -0.04
VARSP26640 AC026410.3-201ENST00000514280 936 ntBASIC14.81□□□□□ -0.04
VARSP26640 AC123567.1-201ENST00000548294 1261 ntBASIC14.81□□□□□ -0.04
VARSP26640 AC132938.2-201ENST00000579188 680 ntBASIC14.81□□□□□ -0.04
VARSP26640 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
VARSP26640 AC007431.3-201ENST00000623221 587 ntBASIC14.81□□□□□ -0.04
VARSP26640 AL591163.1-201ENST00000641757 987 ntBASIC14.81□□□□□ -0.04
VARSP26640 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.81□□□□□ -0.04
VARSP26640 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.81□□□□□ -0.04
VARSP26640 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VARSP26640 AC012508.2-201ENST00000567613 1472 ntBASIC14.81□□□□□ -0.04
VARSP26640 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.81□□□□□ -0.04
VARSP26640 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.81□□□□□ -0.04
VARSP26640 Z82170.1-201ENST00000625081 3192 ntBASIC14.81□□□□□ -0.04
VARSP26640 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
VARSP26640 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.8□□□□□ -0.04
VARSP26640 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VARSP26640 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
VARSP26640 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VARSP26640 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.8□□□□□ -0.04
VARSP26640 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
VARSP26640 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.8□□□□□ -0.04
VARSP26640 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.8□□□□□ -0.04
VARSP26640 AC007389.4-201ENST00000454674 793 ntBASIC14.8□□□□□ -0.04
VARSP26640 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.8□□□□□ -0.04
VARSP26640 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.8□□□□□ -0.04
VARSP26640 AC104596.2-201ENST00000512793 793 ntBASIC14.8□□□□□ -0.04
VARSP26640 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.8□□□□□ -0.04
VARSP26640 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC14.8□□□□□ -0.04
VARSP26640 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.8□□□□□ -0.04
VARSP26640 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.8□□□□□ -0.04
VARSP26640 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.8□□□□□ -0.04
VARSP26640 BRI3BPP1-201ENST00000594224 787 ntBASIC14.8□□□□□ -0.04
VARSP26640 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.8□□□□□ -0.04
VARSP26640 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.8□□□□□ -0.04
VARSP26640 AC093726.1-201ENST00000608064 963 ntBASIC14.8□□□□□ -0.04
VARSP26640 BNIP3P41-202ENST00000616656 861 ntBASIC14.8□□□□□ -0.04
VARSP26640 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VARSP26640 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.8□□□□□ -0.04
VARSP26640 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
VARSP26640 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VARSP26640 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
VARSP26640 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.8□□□□□ -0.04
VARSP26640 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.8□□□□□ -0.04
VARSP26640 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms