Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP11P24347 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MMP11P24347 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.22□□□□□ -0.13
MMP11P24347 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP11P24347 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
MMP11P24347 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP11P24347 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MMP11P24347 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP11P24347 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.22□□□□□ -0.13
MMP11P24347 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP11P24347 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
MMP11P24347 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP11P24347 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.21□□□□□ -0.13
MMP11P24347 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
MMP11P24347 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP11P24347 REXO1L2P-201ENST00000425429 2069 ntBASIC14.21□□□□□ -0.13
MMP11P24347 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP11P24347 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.21□□□□□ -0.13
MMP11P24347 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
MMP11P24347 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP11P24347 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP11P24347 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP11P24347 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
MMP11P24347 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
MMP11P24347 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP11P24347 MIR326-201ENST00000362220 95 ntBASIC14.21□□□□□ -0.13
MMP11P24347 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP11P24347 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP11P24347 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP11P24347 BTBD6P1-201ENST00000412176 1267 ntBASIC14.21□□□□□ -0.13
MMP11P24347 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.21□□□□□ -0.13
MMP11P24347 HOMER2P2-201ENST00000451621 847 ntBASIC14.21□□□□□ -0.13
MMP11P24347 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
MMP11P24347 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
MMP11P24347 MIR4741-201ENST00000579822 90 ntBASIC14.21□□□□□ -0.13
MMP11P24347 EEF1DP1-201ENST00000585891 896 ntBASIC14.21□□□□□ -0.13
MMP11P24347 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP11P24347 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.21□□□□□ -0.13
MMP11P24347 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.21□□□□□ -0.13
MMP11P24347 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP11P24347 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP11P24347 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.21□□□□□ -0.13
MMP11P24347 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
MMP11P24347 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MMP11P24347 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
MMP11P24347 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MMP11P24347 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MMP11P24347 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.21□□□□□ -0.14
MMP11P24347 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
MMP11P24347 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MMP11P24347 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
MMP11P24347 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.21□□□□□ -0.14
MMP11P24347 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
MMP11P24347 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP11P24347 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
MMP11P24347 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
MMP11P24347 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
MMP11P24347 AC139749.1-202ENST00000617529 3139 ntBASIC14.2□□□□□ -0.14
MMP11P24347 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP11P24347 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.2□□□□□ -0.14
MMP11P24347 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP11P24347 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP11P24347 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.2□□□□□ -0.14
MMP11P24347 FAM8A4P-201ENST00000435433 1213 ntBASIC14.2□□□□□ -0.14
MMP11P24347 CNN2P10-201ENST00000443067 918 ntBASIC14.2□□□□□ -0.14
MMP11P24347 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.2□□□□□ -0.14
MMP11P24347 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP11P24347 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.2□□□□□ -0.14
MMP11P24347 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP11P24347 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
MMP11P24347 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.2□□□□□ -0.14
MMP11P24347 GPR182-203ENST00000622922 591 ntBASIC14.2□□□□□ -0.14
MMP11P24347 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
MMP11P24347 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP11P24347 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.2□□□□□ -0.14
MMP11P24347 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP11P24347 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms