Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.92□□□□□ -0.18
UBL4AP11441 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.92□□□□□ -0.18
UBL4AP11441 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.92□□□□□ -0.18
UBL4AP11441 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.92□□□□□ -0.18
UBL4AP11441 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.92□□□□□ -0.18
UBL4AP11441 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.92□□□□□ -0.18
UBL4AP11441 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.92□□□□□ -0.18
UBL4AP11441 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.92□□□□□ -0.18
UBL4AP11441 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.92□□□□□ -0.18
UBL4AP11441 AC114812.1-204ENST00000449669 728 ntBASIC13.92□□□□□ -0.18
UBL4AP11441 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
UBL4AP11441 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.92□□□□□ -0.18
UBL4AP11441 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.92□□□□□ -0.18
UBL4AP11441 AP001063.1-201ENST00000568332 529 ntBASIC13.92□□□□□ -0.18
UBL4AP11441 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.92□□□□□ -0.18
UBL4AP11441 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.92□□□□□ -0.18
UBL4AP11441 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.92□□□□□ -0.18
UBL4AP11441 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.92□□□□□ -0.18
UBL4AP11441 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.92□□□□□ -0.18
UBL4AP11441 AP005019.2-201ENST00000615104 511 ntBASIC13.92□□□□□ -0.18
UBL4AP11441 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
UBL4AP11441 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
UBL4AP11441 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.92□□□□□ -0.18
UBL4AP11441 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
UBL4AP11441 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
UBL4AP11441 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBL4AP11441 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
UBL4AP11441 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
UBL4AP11441 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
UBL4AP11441 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
UBL4AP11441 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
UBL4AP11441 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
UBL4AP11441 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.91□□□□□ -0.18
UBL4AP11441 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.91□□□□□ -0.18
UBL4AP11441 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
UBL4AP11441 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
UBL4AP11441 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
UBL4AP11441 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.91□□□□□ -0.18
UBL4AP11441 DGCR5-201ENST00000399539 862 ntBASIC13.91□□□□□ -0.18
UBL4AP11441 KLF2P2-201ENST00000416807 1039 ntBASIC13.91□□□□□ -0.18
UBL4AP11441 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.91□□□□□ -0.18
UBL4AP11441 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.91□□□□□ -0.18
UBL4AP11441 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 KRT18P25-201ENST00000508931 1278 ntBASIC13.91□□□□□ -0.18
UBL4AP11441 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
UBL4AP11441 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
UBL4AP11441 AC022616.1-201ENST00000518688 554 ntBASIC13.91□□□□□ -0.18
UBL4AP11441 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.91□□□□□ -0.18
UBL4AP11441 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.91□□□□□ -0.18
UBL4AP11441 AC027307.3-201ENST00000594262 1100 ntBASIC13.91□□□□□ -0.18
UBL4AP11441 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.91□□□□□ -0.18
UBL4AP11441 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.91□□□□□ -0.18
UBL4AP11441 AL033527.5-201ENST00000641382 801 ntBASIC13.91□□□□□ -0.18
UBL4AP11441 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
UBL4AP11441 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
UBL4AP11441 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBL4AP11441 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
UBL4AP11441 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
UBL4AP11441 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms