Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RARAP10276 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.71■□□□□ 0.11
RARAP10276 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.71■□□□□ 0.11
RARAP10276 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RARAP10276 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.71■□□□□ 0.11
RARAP10276 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RARAP10276 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.71■□□□□ 0.11
RARAP10276 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RARAP10276 ACKR1-201ENST00000368121 1240 ntBASIC15.71■□□□□ 0.11
RARAP10276 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.71■□□□□ 0.11
RARAP10276 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.71■□□□□ 0.11
RARAP10276 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.71■□□□□ 0.11
RARAP10276 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RARAP10276 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.71■□□□□ 0.11
RARAP10276 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.71■□□□□ 0.11
RARAP10276 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.71■□□□□ 0.11
RARAP10276 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RARAP10276 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RARAP10276 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RARAP10276 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RARAP10276 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
RARAP10276 CICP20-201ENST00000443330 2801 ntBASIC15.71■□□□□ 0.1
RARAP10276 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RARAP10276 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RARAP10276 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.71■□□□□ 0.1
RARAP10276 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RARAP10276 AC126755.1-201ENST00000525846 6405 ntBASIC15.7■□□□□ 0.1
RARAP10276 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RARAP10276 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RARAP10276 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RARAP10276 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.7■□□□□ 0.1
RARAP10276 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RARAP10276 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RARAP10276 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
RARAP10276 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RARAP10276 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.7■□□□□ 0.1
RARAP10276 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RARAP10276 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.7■□□□□ 0.1
RARAP10276 HMGN1P19-201ENST00000436976 333 ntBASIC15.7■□□□□ 0.1
RARAP10276 AL162726.2-201ENST00000438986 1017 ntBASIC15.7■□□□□ 0.1
RARAP10276 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.7■□□□□ 0.1
RARAP10276 AC093433.1-201ENST00000458048 571 ntBASIC15.7■□□□□ 0.1
RARAP10276 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RARAP10276 AC022447.6-201ENST00000515522 438 ntBASIC15.7■□□□□ 0.1
RARAP10276 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.7■□□□□ 0.1
RARAP10276 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.7■□□□□ 0.1
RARAP10276 AP001063.1-201ENST00000568332 529 ntBASIC15.7■□□□□ 0.1
RARAP10276 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RARAP10276 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.7■□□□□ 0.1
RARAP10276 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.7■□□□□ 0.1
RARAP10276 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
RARAP10276 AL033527.5-201ENST00000641382 801 ntBASIC15.7■□□□□ 0.1
RARAP10276 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RARAP10276 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RARAP10276 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.7■□□□□ 0.1
RARAP10276 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.7■□□□□ 0.1
RARAP10276 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RARAP10276 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RARAP10276 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RARAP10276 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.7■□□□□ 0.1
RARAP10276 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RARAP10276 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RARAP10276 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RARAP10276 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RARAP10276 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RARAP10276 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.69■□□□□ 0.1
RARAP10276 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.69■□□□□ 0.1
RARAP10276 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.69■□□□□ 0.1
RARAP10276 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.69■□□□□ 0.1
RARAP10276 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RARAP10276 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.69■□□□□ 0.1
RARAP10276 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms