Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HOXC6P09630 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HOXC6P09630 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HOXC6P09630 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.69■□□□□ 0.26
HOXC6P09630 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.69■□□□□ 0.26
HOXC6P09630 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 RPSAP15-201ENST00000448168 861 ntBASIC16.69■□□□□ 0.26
HOXC6P09630 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.69■□□□□ 0.26
HOXC6P09630 AC079112.1-201ENST00000454972 939 ntBASIC16.69■□□□□ 0.26
HOXC6P09630 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.69■□□□□ 0.26
HOXC6P09630 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HOXC6P09630 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
HOXC6P09630 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.69■□□□□ 0.26
HOXC6P09630 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.69■□□□□ 0.26
HOXC6P09630 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.69■□□□□ 0.26
HOXC6P09630 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.69■□□□□ 0.26
HOXC6P09630 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.69■□□□□ 0.26
HOXC6P09630 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HOXC6P09630 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.69■□□□□ 0.26
HOXC6P09630 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.69■□□□□ 0.26
HOXC6P09630 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 TMBIM7P-202ENST00000641474 1516 ntBASIC16.69■□□□□ 0.26
HOXC6P09630 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
HOXC6P09630 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.69■□□□□ 0.26
HOXC6P09630 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.69■□□□□ 0.26
HOXC6P09630 AHCYP4-201ENST00000419201 1315 ntBASIC16.69■□□□□ 0.26
HOXC6P09630 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.69■□□□□ 0.26
HOXC6P09630 KRT18P9-201ENST00000604826 1300 ntBASIC16.69■□□□□ 0.26
HOXC6P09630 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HOXC6P09630 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC6P09630 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.68■□□□□ 0.26
HOXC6P09630 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.68■□□□□ 0.26
HOXC6P09630 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC6P09630 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HOXC6P09630 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC6P09630 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.68■□□□□ 0.26
HOXC6P09630 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC6P09630 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC6P09630 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC6P09630 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.68■□□□□ 0.26
HOXC6P09630 AL627422.1-201ENST00000434104 580 ntBASIC16.68■□□□□ 0.26
HOXC6P09630 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.68■□□□□ 0.26
HOXC6P09630 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC6P09630 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC6P09630 AC092299.1-201ENST00000632679 757 ntBASIC16.68■□□□□ 0.26
HOXC6P09630 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC6P09630 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC6P09630 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.68■□□□□ 0.26
HOXC6P09630 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.68■□□□□ 0.26
HOXC6P09630 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HOXC6P09630 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.68■□□□□ 0.26
HOXC6P09630 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC6P09630 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HOXC6P09630 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.68■□□□□ 0.26
HOXC6P09630 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC6P09630 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.68■□□□□ 0.26
HOXC6P09630 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC6P09630 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC6P09630 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HOXC6P09630 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXC6P09630 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.67■□□□□ 0.26
HOXC6P09630 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXC6P09630 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HOXC6P09630 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 CICP6-201ENST00000457191 2729 ntBASIC16.67■□□□□ 0.26
HOXC6P09630 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXC6P09630 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.67■□□□□ 0.26
HOXC6P09630 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.67■□□□□ 0.26
HOXC6P09630 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.67■□□□□ 0.26
HOXC6P09630 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXC6P09630 RPL18AP3-201ENST00000462885 528 ntBASIC16.67■□□□□ 0.26
HOXC6P09630 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms