Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.12■□□□□ 0.49
CSF1RP07333 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.12■□□□□ 0.49
CSF1RP07333 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CSF1RP07333 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.12■□□□□ 0.49
CSF1RP07333 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CSF1RP07333 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.12■□□□□ 0.49
CSF1RP07333 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CSF1RP07333 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
CSF1RP07333 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CSF1RP07333 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSF1RP07333 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.12■□□□□ 0.49
CSF1RP07333 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSF1RP07333 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.12■□□□□ 0.49
CSF1RP07333 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CSF1RP07333 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CSF1RP07333 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CSF1RP07333 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.11■□□□□ 0.49
CSF1RP07333 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.11■□□□□ 0.49
CSF1RP07333 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.11■□□□□ 0.49
CSF1RP07333 TSPY25P-201ENST00000429463 745 ntBASIC18.11■□□□□ 0.49
CSF1RP07333 MAGEA5-201ENST00000446757 942 ntBASIC18.11■□□□□ 0.49
CSF1RP07333 EEF1DP6-201ENST00000449232 372 ntBASIC18.11■□□□□ 0.49
CSF1RP07333 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.11■□□□□ 0.49
CSF1RP07333 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.11■□□□□ 0.49
CSF1RP07333 AC027237.1-201ENST00000560942 655 ntBASIC18.11■□□□□ 0.49
CSF1RP07333 PRKXP1-201ENST00000561423 1122 ntBASIC18.11■□□□□ 0.49
CSF1RP07333 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.11■□□□□ 0.49
CSF1RP07333 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.11■□□□□ 0.49
CSF1RP07333 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.11■□□□□ 0.49
CSF1RP07333 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.11■□□□□ 0.49
CSF1RP07333 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.11■□□□□ 0.49
CSF1RP07333 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.11■□□□□ 0.49
CSF1RP07333 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC18.11■□□□□ 0.49
CSF1RP07333 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CSF1RP07333 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.11■□□□□ 0.49
CSF1RP07333 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1RP07333 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CSF1RP07333 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CSF1RP07333 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CSF1RP07333 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.1■□□□□ 0.49
CSF1RP07333 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CSF1RP07333 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CSF1RP07333 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.1■□□□□ 0.49
CSF1RP07333 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC18.1■□□□□ 0.49
CSF1RP07333 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.1■□□□□ 0.49
CSF1RP07333 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.1■□□□□ 0.49
CSF1RP07333 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.1■□□□□ 0.49
CSF1RP07333 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CSF1RP07333 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.1■□□□□ 0.49
CSF1RP07333 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.1■□□□□ 0.49
CSF1RP07333 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.1■□□□□ 0.49
CSF1RP07333 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.1■□□□□ 0.49
CSF1RP07333 AC124068.2-201ENST00000569473 1109 ntBASIC18.1■□□□□ 0.49
CSF1RP07333 MIR6769A-201ENST00000617340 73 ntBASIC18.1■□□□□ 0.49
CSF1RP07333 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.1■□□□□ 0.49
CSF1RP07333 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.1■□□□□ 0.49
CSF1RP07333 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1RP07333 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms