Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.83■□□□□ 0.28
TPM3P06753 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TPM3P06753 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 NUTM2HP-201ENST00000442076 2498 ntBASIC16.83■□□□□ 0.28
TPM3P06753 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.83■□□□□ 0.28
TPM3P06753 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TPM3P06753 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.83■□□□□ 0.28
TPM3P06753 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.83■□□□□ 0.28
TPM3P06753 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.83■□□□□ 0.28
TPM3P06753 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.83■□□□□ 0.28
TPM3P06753 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
TPM3P06753 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC16.83■□□□□ 0.28
TPM3P06753 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC16.83■□□□□ 0.28
TPM3P06753 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM3P06753 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM3P06753 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM3P06753 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM3P06753 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM3P06753 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TPM3P06753 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TPM3P06753 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM3P06753 AC018665.1-201ENST00000622927 1362 ntBASIC16.82■□□□□ 0.28
TPM3P06753 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM3P06753 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TPM3P06753 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TPM3P06753 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM3P06753 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM3P06753 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM3P06753 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.82■□□□□ 0.28
TPM3P06753 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM3P06753 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.82■□□□□ 0.28
TPM3P06753 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.82■□□□□ 0.28
TPM3P06753 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TPM3P06753 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM3P06753 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM3P06753 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM3P06753 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM3P06753 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM3P06753 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM3P06753 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TPM3P06753 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TPM3P06753 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM3P06753 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM3P06753 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM3P06753 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM3P06753 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TPM3P06753 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TPM3P06753 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM3P06753 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
TPM3P06753 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TPM3P06753 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TPM3P06753 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM3P06753 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TPM3P06753 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TPM3P06753 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM3P06753 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms