Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.86■□□□□ 0.45
CHGBP05060 CICP12-201ENST00000455801 843 ntBASIC17.86■□□□□ 0.45
CHGBP05060 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.86■□□□□ 0.45
CHGBP05060 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.86■□□□□ 0.45
CHGBP05060 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.86■□□□□ 0.45
CHGBP05060 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.86■□□□□ 0.45
CHGBP05060 RN7SL219P-201ENST00000582872 296 ntBASIC17.86■□□□□ 0.45
CHGBP05060 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.86■□□□□ 0.45
CHGBP05060 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.86■□□□□ 0.45
CHGBP05060 BX088702.1-201ENST00000610784 235 ntBASIC17.86■□□□□ 0.45
CHGBP05060 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 SHC1P1-201ENST00000425230 1745 ntBASIC17.86■□□□□ 0.45
CHGBP05060 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHGBP05060 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
CHGBP05060 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHGBP05060 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHGBP05060 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.85■□□□□ 0.45
CHGBP05060 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHGBP05060 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHGBP05060 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHGBP05060 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHGBP05060 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHGBP05060 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHGBP05060 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHGBP05060 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHGBP05060 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.85■□□□□ 0.45
CHGBP05060 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CHGBP05060 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHGBP05060 MIR663B-201ENST00000408361 115 ntBASIC17.85■□□□□ 0.45
CHGBP05060 AC010141.1-201ENST00000411585 623 ntBASIC17.85■□□□□ 0.45
CHGBP05060 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.85■□□□□ 0.45
CHGBP05060 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.85■□□□□ 0.45
CHGBP05060 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHGBP05060 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.85■□□□□ 0.45
CHGBP05060 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHGBP05060 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHGBP05060 AC104982.3-201ENST00000581995 514 ntBASIC17.85■□□□□ 0.45
CHGBP05060 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CHGBP05060 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.85■□□□□ 0.45
CHGBP05060 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHGBP05060 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CHGBP05060 AC117489.1-201ENST00000625169 3217 ntBASIC17.85■□□□□ 0.45
CHGBP05060 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHGBP05060 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CHGBP05060 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CHGBP05060 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CHGBP05060 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 AC113367.3-201ENST00000508316 1912 ntBASIC17.84■□□□□ 0.45
CHGBP05060 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.84■□□□□ 0.45
CHGBP05060 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CHGBP05060 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.84■□□□□ 0.45
CHGBP05060 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.84■□□□□ 0.45
CHGBP05060 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CHGBP05060 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.84■□□□□ 0.45
CHGBP05060 BRWD1P1-201ENST00000401091 371 ntBASIC17.84■□□□□ 0.45
CHGBP05060 AC104306.2-201ENST00000451877 341 ntBASIC17.84■□□□□ 0.45
CHGBP05060 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.84■□□□□ 0.45
CHGBP05060 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.84■□□□□ 0.45
CHGBP05060 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.84■□□□□ 0.45
CHGBP05060 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.84■□□□□ 0.45
CHGBP05060 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.84■□□□□ 0.45
CHGBP05060 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
CHGBP05060 AL118558.3-201ENST00000607414 1079 ntBASIC17.84■□□□□ 0.45
CHGBP05060 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.84■□□□□ 0.45
CHGBP05060 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.84■□□□□ 0.45
CHGBP05060 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.84■□□□□ 0.45
CHGBP05060 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 AC092135.3-201ENST00000624151 1846 ntBASIC17.84■□□□□ 0.45
CHGBP05060 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.84■□□□□ 0.45
CHGBP05060 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHGBP05060 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CHGBP05060 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms