Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LTN1O94822 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.22■□□□□ 0.67
LTN1O94822 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LTN1O94822 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC19.22■□□□□ 0.67
LTN1O94822 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC19.22■□□□□ 0.67
LTN1O94822 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
LTN1O94822 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LTN1O94822 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LTN1O94822 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC19.22■□□□□ 0.67
LTN1O94822 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LTN1O94822 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LTN1O94822 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LTN1O94822 RPL3P2-204ENST00000413027 1203 ntBASIC19.21■□□□□ 0.67
LTN1O94822 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC19.21■□□□□ 0.67
LTN1O94822 RN7SL396P-201ENST00000471086 295 ntBASIC19.21■□□□□ 0.67
LTN1O94822 REEP5-205ENST00000504247 480 ntTSL 5 BASIC19.21■□□□□ 0.67
LTN1O94822 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC19.21■□□□□ 0.67
LTN1O94822 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC19.21■□□□□ 0.67
LTN1O94822 MAX-218ENST00000557746 571 ntTSL 4 BASIC19.21■□□□□ 0.67
LTN1O94822 C2orf69P1-201ENST00000563532 1093 ntBASIC19.21■□□□□ 0.67
LTN1O94822 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LTN1O94822 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.21■□□□□ 0.67
LTN1O94822 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTN1O94822 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTN1O94822 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTN1O94822 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTN1O94822 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTN1O94822 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC19.21■□□□□ 0.67
LTN1O94822 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LTN1O94822 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.21■□□□□ 0.67
LTN1O94822 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTN1O94822 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTN1O94822 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTN1O94822 ALG1L6P-201ENST00000515248 758 ntBASIC19.21■□□□□ 0.67
LTN1O94822 AC022447.6-201ENST00000515522 438 ntBASIC19.21■□□□□ 0.67
LTN1O94822 MIR4472-1-201ENST00000584349 80 ntBASIC19.21■□□□□ 0.67
LTN1O94822 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LTN1O94822 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTN1O94822 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
LTN1O94822 AC073347.1-201ENST00000421633 2643 ntBASIC19.2■□□□□ 0.66
LTN1O94822 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LTN1O94822 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LTN1O94822 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC19.2■□□□□ 0.66
LTN1O94822 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC19.2■□□□□ 0.66
LTN1O94822 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC19.2■□□□□ 0.66
LTN1O94822 OR5BD1P-201ENST00000532527 817 ntBASIC19.2■□□□□ 0.66
LTN1O94822 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC19.2■□□□□ 0.66
LTN1O94822 TRMT112P3-201ENST00000580149 358 ntBASIC19.2■□□□□ 0.66
LTN1O94822 ST5-261ENST00000626808 1071 ntTSL 5 BASIC19.2■□□□□ 0.66
LTN1O94822 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LTN1O94822 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 AC006372.4-201ENST00000624122 1543 ntBASIC19.2■□□□□ 0.66
LTN1O94822 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
LTN1O94822 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC19.2■□□□□ 0.66
LTN1O94822 AC025183.3-201ENST00000623526 1482 ntBASIC19.2■□□□□ 0.66
LTN1O94822 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC19.2■□□□□ 0.66
LTN1O94822 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LTN1O94822 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC19.2■□□□□ 0.66
LTN1O94822 PAUPAR-201ENST00000630360 2965 ntBASIC19.2■□□□□ 0.66
LTN1O94822 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LTN1O94822 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LTN1O94822 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LTN1O94822 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC19.19■□□□□ 0.66
LTN1O94822 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC19.19■□□□□ 0.66
LTN1O94822 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC19.19■□□□□ 0.66
LTN1O94822 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC19.19■□□□□ 0.66
LTN1O94822 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC19.19■□□□□ 0.66
LTN1O94822 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC19.19■□□□□ 0.66
LTN1O94822 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC19.19■□□□□ 0.66
LTN1O94822 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LTN1O94822 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LTN1O94822 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 LINC00554-201ENST00000564841 3011 ntBASIC19.19■□□□□ 0.66
LTN1O94822 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
LTN1O94822 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms