Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SCN2BO60939 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SCN2BO60939 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SCN2BO60939 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.21□□□□□ -0.13
SCN2BO60939 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SCN2BO60939 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SCN2BO60939 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.21□□□□□ -0.14
SCN2BO60939 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SCN2BO60939 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SCN2BO60939 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SCN2BO60939 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.21□□□□□ -0.14
SCN2BO60939 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SCN2BO60939 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.21□□□□□ -0.14
SCN2BO60939 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.21□□□□□ -0.14
SCN2BO60939 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SCN2BO60939 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SCN2BO60939 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SCN2BO60939 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
SCN2BO60939 SLC7A15P-201ENST00000424028 1363 ntBASIC14.21□□□□□ -0.14
SCN2BO60939 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.21□□□□□ -0.14
SCN2BO60939 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.21□□□□□ -0.14
SCN2BO60939 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SCN2BO60939 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.2□□□□□ -0.14
SCN2BO60939 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.2□□□□□ -0.14
SCN2BO60939 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.2□□□□□ -0.14
SCN2BO60939 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.2□□□□□ -0.14
SCN2BO60939 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SCN2BO60939 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 AL442647.2-201ENST00000429864 857 ntBASIC14.2□□□□□ -0.14
SCN2BO60939 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SCN2BO60939 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.2□□□□□ -0.14
SCN2BO60939 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.2□□□□□ -0.14
SCN2BO60939 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.2□□□□□ -0.14
SCN2BO60939 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.2□□□□□ -0.14
SCN2BO60939 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.2□□□□□ -0.14
SCN2BO60939 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.2□□□□□ -0.14
SCN2BO60939 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.2□□□□□ -0.14
SCN2BO60939 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.2□□□□□ -0.14
SCN2BO60939 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SCN2BO60939 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.2□□□□□ -0.14
SCN2BO60939 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.2□□□□□ -0.14
SCN2BO60939 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SCN2BO60939 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.2□□□□□ -0.14
SCN2BO60939 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.2□□□□□ -0.14
SCN2BO60939 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SCN2BO60939 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCN2BO60939 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.19□□□□□ -0.14
SCN2BO60939 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SCN2BO60939 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.19□□□□□ -0.14
SCN2BO60939 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
SCN2BO60939 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SCN2BO60939 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SCN2BO60939 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 BASP1P1-201ENST00000430708 665 ntBASIC14.19□□□□□ -0.14
SCN2BO60939 EIF3FP3-201ENST00000434851 1086 ntBASIC14.19□□□□□ -0.14
SCN2BO60939 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.19□□□□□ -0.14
SCN2BO60939 AC114812.1-204ENST00000449669 728 ntBASIC14.19□□□□□ -0.14
SCN2BO60939 AC092183.1-201ENST00000469884 875 ntBASIC14.19□□□□□ -0.14
SCN2BO60939 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 AC093004.1-201ENST00000508850 424 ntBASIC14.19□□□□□ -0.14
SCN2BO60939 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.19□□□□□ -0.14
SCN2BO60939 AC022616.1-201ENST00000518688 554 ntBASIC14.19□□□□□ -0.14
SCN2BO60939 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.19□□□□□ -0.14
SCN2BO60939 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.19□□□□□ -0.14
SCN2BO60939 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.19□□□□□ -0.14
SCN2BO60939 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms