Protein–RNA interactions for Protein: O00329

PIK3CD, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform, humanhuman

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CDO00329 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PIK3CDO00329 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PIK3CDO00329 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIK3CDO00329 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PIK3CDO00329 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIK3CDO00329 AL133338.1-201ENST00000565695 1517 ntBASIC16.79■□□□□ 0.28
PIK3CDO00329 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PIK3CDO00329 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIK3CDO00329 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.79■□□□□ 0.28
PIK3CDO00329 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIK3CDO00329 AC023824.1-201ENST00000562945 2975 ntBASIC16.79■□□□□ 0.28
PIK3CDO00329 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIK3CDO00329 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PIK3CDO00329 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PIK3CDO00329 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIK3CDO00329 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PIK3CDO00329 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIK3CDO00329 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PIK3CDO00329 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.78■□□□□ 0.28
PIK3CDO00329 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIK3CDO00329 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIK3CDO00329 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.78■□□□□ 0.28
PIK3CDO00329 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIK3CDO00329 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIK3CDO00329 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.78■□□□□ 0.28
PIK3CDO00329 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PIK3CDO00329 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIK3CDO00329 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIK3CDO00329 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIK3CDO00329 FNTAP2-201ENST00000430308 634 ntBASIC16.78■□□□□ 0.28
PIK3CDO00329 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.78■□□□□ 0.28
PIK3CDO00329 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.78■□□□□ 0.28
PIK3CDO00329 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.78■□□□□ 0.28
PIK3CDO00329 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.78■□□□□ 0.28
PIK3CDO00329 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.78■□□□□ 0.28
PIK3CDO00329 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.78■□□□□ 0.28
PIK3CDO00329 TMBIM7P-202ENST00000641474 1516 ntBASIC16.78■□□□□ 0.28
PIK3CDO00329 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIK3CDO00329 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIK3CDO00329 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIK3CDO00329 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PIK3CDO00329 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.78■□□□□ 0.28
PIK3CDO00329 AC006504.5-208ENST00000588784 2401 ntBASIC16.78■□□□□ 0.28
PIK3CDO00329 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.78■□□□□ 0.28
PIK3CDO00329 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIK3CDO00329 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIK3CDO00329 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.78■□□□□ 0.28
PIK3CDO00329 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PIK3CDO00329 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.77■□□□□ 0.28
PIK3CDO00329 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PIK3CDO00329 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PIK3CDO00329 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PIK3CDO00329 DBET-201ENST00000630918 3363 ntBASIC16.77■□□□□ 0.28
PIK3CDO00329 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PIK3CDO00329 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PIK3CDO00329 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PIK3CDO00329 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PIK3CDO00329 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.77■□□□□ 0.28
PIK3CDO00329 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PIK3CDO00329 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PIK3CDO00329 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.77■□□□□ 0.28
PIK3CDO00329 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.77■□□□□ 0.28
PIK3CDO00329 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PIK3CDO00329 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PIK3CDO00329 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PIK3CDO00329 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PIK3CDO00329 AC006122.1-201ENST00000493323 440 ntBASIC16.77■□□□□ 0.28
PIK3CDO00329 SCARNA21-201ENST00000517026 139 ntBASIC16.77■□□□□ 0.28
PIK3CDO00329 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.77■□□□□ 0.28
PIK3CDO00329 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.77■□□□□ 0.28
PIK3CDO00329 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.77■□□□□ 0.28
PIK3CDO00329 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.77■□□□□ 0.28
PIK3CDO00329 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.77■□□□□ 0.28
PIK3CDO00329 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PIK3CDO00329 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.77■□□□□ 0.28
PIK3CDO00329 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.77■□□□□ 0.28
PIK3CDO00329 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PIK3CDO00329 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PIK3CDO00329 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PIK3CDO00329 AC144522.1-201ENST00000625111 1658 ntBASIC16.77■□□□□ 0.28
PIK3CDO00329 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PIK3CDO00329 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.77■□□□□ 0.27
PIK3CDO00329 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PIK3CDO00329 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PIK3CDO00329 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
PIK3CDO00329 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.77■□□□□ 0.27
PIK3CDO00329 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.77■□□□□ 0.27
PIK3CDO00329 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PIK3CDO00329 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.76■□□□□ 0.27
PIK3CDO00329 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PIK3CDO00329 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.76■□□□□ 0.27
PIK3CDO00329 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PIK3CDO00329 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PIK3CDO00329 TUBBP5-203ENST00000508529 1334 ntBASIC16.76■□□□□ 0.27
PIK3CDO00329 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PIK3CDO00329 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PIK3CDO00329 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.76■□□□□ 0.27
PIK3CDO00329 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PIK3CDO00329 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PIK3CDO00329 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms