Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
UPK1AO00322 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UPK1AO00322 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.18□□□□□ -0.14
UPK1AO00322 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
UPK1AO00322 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 RNU1-114P-201ENST00000365297 166 ntBASIC14.18□□□□□ -0.14
UPK1AO00322 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.18□□□□□ -0.14
UPK1AO00322 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UPK1AO00322 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.18□□□□□ -0.14
UPK1AO00322 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.18□□□□□ -0.14
UPK1AO00322 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.18□□□□□ -0.14
UPK1AO00322 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.18□□□□□ -0.14
UPK1AO00322 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.18□□□□□ -0.14
UPK1AO00322 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.18□□□□□ -0.14
UPK1AO00322 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UPK1AO00322 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
UPK1AO00322 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.18□□□□□ -0.14
UPK1AO00322 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
UPK1AO00322 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.18□□□□□ -0.14
UPK1AO00322 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.18□□□□□ -0.14
UPK1AO00322 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
UPK1AO00322 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.18□□□□□ -0.14
UPK1AO00322 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.17□□□□□ -0.14
UPK1AO00322 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.17□□□□□ -0.14
UPK1AO00322 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.17□□□□□ -0.14
UPK1AO00322 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.17□□□□□ -0.14
UPK1AO00322 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.17□□□□□ -0.14
UPK1AO00322 DGCR5-201ENST00000399539 862 ntBASIC14.17□□□□□ -0.14
UPK1AO00322 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.17□□□□□ -0.14
UPK1AO00322 KLF2P2-201ENST00000416807 1039 ntBASIC14.17□□□□□ -0.14
UPK1AO00322 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 CRB3P1-201ENST00000449338 276 ntBASIC14.17□□□□□ -0.14
UPK1AO00322 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.17□□□□□ -0.14
UPK1AO00322 DUX4L47-201ENST00000566374 394 ntBASIC14.17□□□□□ -0.14
UPK1AO00322 CLUHP6-201ENST00000580789 941 ntBASIC14.17□□□□□ -0.14
UPK1AO00322 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
UPK1AO00322 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 AP005019.2-201ENST00000615104 511 ntBASIC14.17□□□□□ -0.14
UPK1AO00322 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.17□□□□□ -0.14
UPK1AO00322 CU634019.7-201ENST00000624153 1185 ntBASIC14.17□□□□□ -0.14
UPK1AO00322 FP236241.2-201ENST00000624906 1185 ntBASIC14.17□□□□□ -0.14
UPK1AO00322 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.17□□□□□ -0.14
UPK1AO00322 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.17□□□□□ -0.14
UPK1AO00322 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.17□□□□□ -0.14
UPK1AO00322 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 CICP8-201ENST00000455800 2813 ntBASIC14.17□□□□□ -0.14
UPK1AO00322 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
UPK1AO00322 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.17□□□□□ -0.14
UPK1AO00322 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
UPK1AO00322 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.17□□□□□ -0.14
UPK1AO00322 TCAF1P1-201ENST00000414990 2232 ntBASIC14.17□□□□□ -0.14
UPK1AO00322 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1AO00322 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
UPK1AO00322 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
UPK1AO00322 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.16□□□□□ -0.14
UPK1AO00322 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.16□□□□□ -0.14
UPK1AO00322 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.16□□□□□ -0.14
UPK1AO00322 AC099521.3-201ENST00000624251 2938 ntBASIC14.16□□□□□ -0.14
UPK1AO00322 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms