Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 CHCHD2P3-201ENST00000603038 451 ntBASIC11.07□□□□□ -0.64
NACAE9PAV3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC11.07□□□□□ -0.64
NACAE9PAV3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC11.07□□□□□ -0.64
NACAE9PAV3 AL358472.5-202ENST00000641448 1267 ntBASIC11.07□□□□□ -0.64
NACAE9PAV3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
NACAE9PAV3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.07□□□□□ -0.64
NACAE9PAV3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
NACAE9PAV3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
NACAE9PAV3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.06□□□□□ -0.64
NACAE9PAV3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
NACAE9PAV3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
NACAE9PAV3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC11.06□□□□□ -0.64
NACAE9PAV3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
NACAE9PAV3 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC11.06□□□□□ -0.64
NACAE9PAV3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
NACAE9PAV3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.06□□□□□ -0.64
NACAE9PAV3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC11.06□□□□□ -0.64
NACAE9PAV3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.06□□□□□ -0.64
NACAE9PAV3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.06□□□□□ -0.64
NACAE9PAV3 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
NACAE9PAV3 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
NACAE9PAV3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
NACAE9PAV3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NACAE9PAV3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
NACAE9PAV3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
NACAE9PAV3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
NACAE9PAV3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
NACAE9PAV3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.06□□□□□ -0.64
NACAE9PAV3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
NACAE9PAV3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NACAE9PAV3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NACAE9PAV3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NACAE9PAV3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
NACAE9PAV3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.05□□□□□ -0.64
NACAE9PAV3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NACAE9PAV3 OR8S1-201ENST00000310194 1080 ntBASIC11.05□□□□□ -0.64
NACAE9PAV3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
NACAE9PAV3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NACAE9PAV3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.05□□□□□ -0.64
NACAE9PAV3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.05□□□□□ -0.64
NACAE9PAV3 KRT18P43-201ENST00000469825 1281 ntBASIC11.05□□□□□ -0.64
NACAE9PAV3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC11.05□□□□□ -0.64
NACAE9PAV3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms