Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRRM4A7MD48 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 LRRC59-203ENST00000576448 1531 ntBASIC12.06□□□□□ -0.48
SRRM4A7MD48 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 ACTBP8-201ENST00000403258 1108 ntBASIC12.06□□□□□ -0.48
SRRM4A7MD48 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.06□□□□□ -0.48
SRRM4A7MD48 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 AC093433.1-201ENST00000458048 571 ntBASIC12.06□□□□□ -0.48
SRRM4A7MD48 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.06□□□□□ -0.48
SRRM4A7MD48 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 CU634019.7-201ENST00000624153 1185 ntBASIC12.06□□□□□ -0.48
SRRM4A7MD48 FP236241.2-201ENST00000624906 1185 ntBASIC12.06□□□□□ -0.48
SRRM4A7MD48 AL603764.1-201ENST00000636452 321 ntBASIC12.06□□□□□ -0.48
SRRM4A7MD48 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
SRRM4A7MD48 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM4A7MD48 CICP4-201ENST00000447359 2812 ntBASIC12.06□□□□□ -0.48
SRRM4A7MD48 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 SALL4P5-201ENST00000419001 1760 ntBASIC12.05□□□□□ -0.48
SRRM4A7MD48 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms