Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 AC097359.2-201ENST00000604992 2389 ntBASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 COCH-203ENST00000460581 2688 ntTSL 2 BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 ADK-205ENST00000539909 1866 ntTSL 2 BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 AC138028.6-201ENST00000616106 1482 ntBASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 AC104073.2-201ENST00000453737 312 ntBASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 AC008805.1-201ENST00000590892 364 ntBASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 AC243960.2-201ENST00000600996 747 ntBASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 AL136295.7-201ENST00000619226 1200 ntBASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 AC090386.2-201ENST00000623010 1039 ntBASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 AC011498.7-201ENST00000624986 2027 ntBASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPC1L1Q9UHC9 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 JTB-202ENST00000356648 1040 ntTSL 2 BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 AC005740.2-201ENST00000511085 419 ntBASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 SCARNA20.5-201ENST00000516991 142 ntBASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 AP001258.2-201ENST00000529891 490 ntBASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 DRG2-220ENST00000583355 891 ntTSL 3 BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 AL157813.1-201ENST00000612996 587 ntBASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 AC138649.2-201ENST00000615886 705 ntBASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NPC1L1Q9UHC9 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 AC020910.6-201ENST00000623084 1459 ntBASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 AC125604.1-201ENST00000496255 707 ntBASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 PGAM1P5-201ENST00000548011 764 ntBASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 AC124068.2-201ENST00000569473 1109 ntBASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC19.77■□□□□ 0.76
NPC1L1Q9UHC9 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.77■□□□□ 0.75
NPC1L1Q9UHC9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NPC1L1Q9UHC9 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
NPC1L1Q9UHC9 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NPC1L1Q9UHC9 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.75
NPC1L1Q9UHC9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NPC1L1Q9UHC9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms