Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 AC092506.1-202ENST00000401022 528 ntBASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 RN7SL769P-201ENST00000469386 295 ntBASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 RPL18P13-201ENST00000478088 569 ntBASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 AC091812.3-201ENST00000621362 345 ntBASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 AL805961.1-203ENST00000641078 1258 ntBASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LRIT1Q9P2V4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 AC012441.2-201ENST00000444843 739 ntBASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 MARK2P5-201ENST00000507649 634 ntBASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 CHMP4BP1-201ENST00000556017 588 ntBASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 AC105129.2-201ENST00000559536 390 ntBASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 AC079328.1-201ENST00000560358 952 ntBASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 AL109954.1-202ENST00000564051 2148 ntBASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 AC132192.2-201ENST00000596206 1147 ntBASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 AC097724.1-201ENST00000609581 426 ntBASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms