Protein–RNA interactions for Protein: Q9P2E5

CHPF2, Chondroitin sulfate glucuronyltransferase, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2Q9P2E5 AC138627.1-207ENST00000641560 1006 ntBASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHPF2Q9P2E5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHPF2Q9P2E5 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.83■□□□□ 0.61
CHPF2Q9P2E5 AC006504.5-208ENST00000588784 2401 ntBASIC18.83■□□□□ 0.61
CHPF2Q9P2E5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CHPF2Q9P2E5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHPF2Q9P2E5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.83■□□□□ 0.61
CHPF2Q9P2E5 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHPF2Q9P2E5 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHPF2Q9P2E5 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC18.83■□□□□ 0.61
CHPF2Q9P2E5 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 AC011742.3-201ENST00000439053 820 ntBASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 AC009779.1-201ENST00000551138 283 ntBASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 AP000346.4-201ENST00000614827 381 ntBASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 AP001505.2-201ENST00000616815 443 ntBASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 AC091544.8-201ENST00000619490 361 ntBASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 AC068587.10-201ENST00000641210 219 ntBASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 CYP4F23P-201ENST00000593402 1579 ntBASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 AP002414.2-201ENST00000591780 3365 ntBASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 TMBIM7P-202ENST00000641474 1516 ntBASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.83■□□□□ 0.6
CHPF2Q9P2E5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 AC008132.1-202ENST00000342005 1389 ntBASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 KRT8P28-201ENST00000433288 1390 ntBASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 AL035414.1-201ENST00000451327 857 ntBASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 RN7SL11P-201ENST00000471305 293 ntBASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 MIR3619-201ENST00000579667 83 ntBASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 AC009884.2-201ENST00000603110 324 ntBASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 AL132994.2-201ENST00000603120 687 ntBASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 AL805961.1-203ENST00000641078 1258 ntBASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.82■□□□□ 0.6
CHPF2Q9P2E5 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms