Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 MROH4P-201ENST00000431302 1578 ntBASIC13.75□□□□□ -0.21
LRFN1Q9P244 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.75□□□□□ -0.21
LRFN1Q9P244 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 AC007663.3-201ENST00000609632 465 ntBASIC13.75□□□□□ -0.21
LRFN1Q9P244 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 AC002472.3-201ENST00000640124 621 ntBASIC13.75□□□□□ -0.21
LRFN1Q9P244 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.75□□□□□ -0.21
LRFN1Q9P244 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRFN1Q9P244 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 MYO15B-237ENST00000642007 4893 ntBASIC13.74□□□□□ -0.21
LRFN1Q9P244 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 RN7SKP175-201ENST00000408472 289 ntBASIC13.74□□□□□ -0.21
LRFN1Q9P244 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 AC091804.1-201ENST00000486888 567 ntBASIC13.74□□□□□ -0.21
LRFN1Q9P244 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 AC126915.1-201ENST00000522847 1038 ntBASIC13.74□□□□□ -0.21
LRFN1Q9P244 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 MIR4683-201ENST00000579659 81 ntBASIC13.74□□□□□ -0.21
LRFN1Q9P244 AC020914.3-201ENST00000594712 304 ntBASIC13.74□□□□□ -0.21
LRFN1Q9P244 AC138696.2-201ENST00000607376 223 ntBASIC13.74□□□□□ -0.21
LRFN1Q9P244 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms