Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC88CQ9P219 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 AC140479.7-201ENST00000636301 2332 ntBASIC14.28□□□□□ -0.12
CCDC88CQ9P219 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 AL645937.2-201ENST00000396808 931 ntBASIC14.28□□□□□ -0.12
CCDC88CQ9P219 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 AL354877.1-201ENST00000424412 413 ntBASIC14.28□□□□□ -0.12
CCDC88CQ9P219 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC88CQ9P219 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 CLUHP2-201ENST00000426660 1303 ntBASIC14.27□□□□□ -0.12
CCDC88CQ9P219 MTHFR-210ENST00000641407 2387 ntBASIC14.27□□□□□ -0.12
CCDC88CQ9P219 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 AC079178.1-201ENST00000420915 656 ntBASIC14.27□□□□□ -0.12
CCDC88CQ9P219 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 PPY2P-201ENST00000582808 702 ntBASIC14.27□□□□□ -0.12
CCDC88CQ9P219 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC88CQ9P219 INE2-201ENST00000630399 1874 ntBASIC14.27□□□□□ -0.13
CCDC88CQ9P219 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CCDC88CQ9P219 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CCDC88CQ9P219 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC88CQ9P219 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC88CQ9P219 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC88CQ9P219 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.27□□□□□ -0.13
CCDC88CQ9P219 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC88CQ9P219 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CCDC88CQ9P219 GOLGA2P4-201ENST00000441462 777 ntBASIC14.27□□□□□ -0.13
CCDC88CQ9P219 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.27□□□□□ -0.13
CCDC88CQ9P219 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CCDC88CQ9P219 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.27□□□□□ -0.13
CCDC88CQ9P219 AL139099.5-201ENST00000635274 300 ntBASIC14.27□□□□□ -0.13
CCDC88CQ9P219 LINC01230-201ENST00000625222 3017 ntBASIC14.27□□□□□ -0.13
CCDC88CQ9P219 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC88CQ9P219 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC88CQ9P219 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms