Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 AC067863.1-201ENST00000494933 530 ntBASIC14.17□□□□□ -0.14
VAPAQ9P0L0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 RARRES2P5-201ENST00000564013 466 ntBASIC14.17□□□□□ -0.14
VAPAQ9P0L0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 AC008738.7-201ENST00000609744 511 ntBASIC14.17□□□□□ -0.14
VAPAQ9P0L0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VAPAQ9P0L0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 SBF1P1-201ENST00000444527 5631 ntBASIC14.16□□□□□ -0.14
VAPAQ9P0L0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 NUS1P3-201ENST00000423502 862 ntBASIC14.16□□□□□ -0.14
VAPAQ9P0L0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 RN7SL399P-201ENST00000471648 279 ntBASIC14.16□□□□□ -0.14
VAPAQ9P0L0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 AC135586.1-201ENST00000539323 574 ntBASIC14.16□□□□□ -0.14
VAPAQ9P0L0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 AC004790.1-201ENST00000612686 536 ntBASIC14.16□□□□□ -0.14
VAPAQ9P0L0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
VAPAQ9P0L0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms