Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNIH4Q9P003 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNIH4Q9P003 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNIH4Q9P003 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 AC104457.1-201ENST00000401024 814 ntBASIC14.06□□□□□ -0.16
CNIH4Q9P003 AC079776.1-201ENST00000401540 1152 ntBASIC14.06□□□□□ -0.16
CNIH4Q9P003 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CNIH4Q9P003 ARSEP1-201ENST00000420443 635 ntBASIC14.06□□□□□ -0.16
CNIH4Q9P003 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 AC244107.1-201ENST00000442033 332 ntBASIC14.06□□□□□ -0.16
CNIH4Q9P003 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 AL359881.2-201ENST00000602973 570 ntBASIC14.06□□□□□ -0.16
CNIH4Q9P003 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNIH4Q9P003 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNIH4Q9P003 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNIH4Q9P003 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNIH4Q9P003 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNIH4Q9P003 LINC01230-201ENST00000625222 3017 ntBASIC14.06□□□□□ -0.16
CNIH4Q9P003 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CNIH4Q9P003 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
CNIH4Q9P003 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNIH4Q9P003 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 BCRP2-202ENST00000447763 634 ntBASIC14.05□□□□□ -0.16
CNIH4Q9P003 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 BCRP6-201ENST00000510112 632 ntBASIC14.05□□□□□ -0.16
CNIH4Q9P003 BCRP7-201ENST00000511549 544 ntBASIC14.05□□□□□ -0.16
CNIH4Q9P003 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 IGHV3-71-201ENST00000523324 359 ntBASIC14.05□□□□□ -0.16
CNIH4Q9P003 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 AL512343.1-201ENST00000605837 169 ntBASIC14.05□□□□□ -0.16
CNIH4Q9P003 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 ST20-AS1-201ENST00000560255 4223 ntBASIC14.05□□□□□ -0.16
CNIH4Q9P003 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.05□□□□□ -0.16
CNIH4Q9P003 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 AC012508.2-201ENST00000567613 1472 ntBASIC14.05□□□□□ -0.16
CNIH4Q9P003 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNIH4Q9P003 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.05□□□□□ -0.16
CNIH4Q9P003 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 AC097359.2-201ENST00000604992 2389 ntBASIC14.04□□□□□ -0.16
CNIH4Q9P003 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms