Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 CICP23-201ENST00000605013 2741 ntBASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 AC025279.2-201ENST00000569730 653 ntBASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 PAX6-247ENST00000638965 979 ntTSL 5 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 AC018529.2-202ENST00000611482 3087 ntBASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 FO681548.1-201ENST00000455617 1132 ntBASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 AL590640.2-201ENST00000457038 527 ntBASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 AC244093.1-201ENST00000610837 814 ntBASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 CICP14-201ENST00000629111 2732 ntBASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.53□□□□□ -0.08
CUEDC1Q9NWM3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms