Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 AC016397.2-201ENST00000624848 1985 ntBASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 BAD-202ENST00000394531 631 ntTSL 3 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 AP006288.1-201ENST00000446065 395 ntBASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 KLF2P3-201ENST00000451977 1087 ntBASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 AC109322.1-201ENST00000524499 1264 ntBASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 BAD-207ENST00000544785 525 ntTSL 3 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 AC140878.1-201ENST00000565277 250 ntBASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 AC027612.4-201ENST00000605371 583 ntBASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 AL844908.2-201ENST00000609461 460 ntBASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 Z92544.3-201ENST00000624747 417 ntBASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 AC090505.1-201ENST00000430515 1834 ntBASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 BTBD7P1-201ENST00000447253 1453 ntBASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 INE2-201ENST00000630399 1874 ntBASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE2Q9NRR3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.75
CDC42SE2Q9NRR3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC10.33□□□□□ -0.75
CDC42SE2Q9NRR3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 KRT8P14-201ENST00000414254 1442 ntBASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 WRB-204ENST00000398753 699 ntTSL 3 BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms