Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 AC011477.6-201ENST00000604980 1927 ntBASIC17.21■□□□□ 0.35
ARID3AQ99856 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARID3AQ99856 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ARID3AQ99856 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ARID3AQ99856 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
ARID3AQ99856 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ARID3AQ99856 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.34
ARID3AQ99856 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.2■□□□□ 0.34
ARID3AQ99856 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARID3AQ99856 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC17.2■□□□□ 0.34
ARID3AQ99856 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARID3AQ99856 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARID3AQ99856 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ARID3AQ99856 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ARID3AQ99856 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARID3AQ99856 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARID3AQ99856 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ARID3AQ99856 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARID3AQ99856 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC17.2■□□□□ 0.34
ARID3AQ99856 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ARID3AQ99856 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
ARID3AQ99856 SPDYE7P-202ENST00000420373 878 ntBASIC17.2■□□□□ 0.34
ARID3AQ99856 MTND6P24-201ENST00000440466 518 ntBASIC17.2■□□□□ 0.34
ARID3AQ99856 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.2■□□□□ 0.34
ARID3AQ99856 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.2■□□□□ 0.34
ARID3AQ99856 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.2■□□□□ 0.34
ARID3AQ99856 RN7SL828P-201ENST00000607615 303 ntBASIC17.2■□□□□ 0.34
ARID3AQ99856 AL589935.2-201ENST00000616471 1231 ntBASIC17.2■□□□□ 0.34
ARID3AQ99856 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ARID3AQ99856 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.2■□□□□ 0.34
ARID3AQ99856 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARID3AQ99856 AC112693.3-201ENST00000624819 1983 ntBASIC17.2■□□□□ 0.34
ARID3AQ99856 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARID3AQ99856 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARID3AQ99856 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ARID3AQ99856 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARID3AQ99856 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARID3AQ99856 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARID3AQ99856 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ARID3AQ99856 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARID3AQ99856 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.19■□□□□ 0.34
ARID3AQ99856 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ARID3AQ99856 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ARID3AQ99856 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ARID3AQ99856 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ARID3AQ99856 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARID3AQ99856 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARID3AQ99856 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARID3AQ99856 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ARID3AQ99856 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.19■□□□□ 0.34
ARID3AQ99856 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ARID3AQ99856 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ARID3AQ99856 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ARID3AQ99856 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.19■□□□□ 0.34
ARID3AQ99856 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARID3AQ99856 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.19■□□□□ 0.34
ARID3AQ99856 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.19■□□□□ 0.34
ARID3AQ99856 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.19■□□□□ 0.34
ARID3AQ99856 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.19■□□□□ 0.34
ARID3AQ99856 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.19■□□□□ 0.34
ARID3AQ99856 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.19■□□□□ 0.34
ARID3AQ99856 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARID3AQ99856 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARID3AQ99856 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ARID3AQ99856 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ARID3AQ99856 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ARID3AQ99856 BX640514.1-201ENST00000583223 1918 ntBASIC17.19■□□□□ 0.34
ARID3AQ99856 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC17.19■□□□□ 0.34
ARID3AQ99856 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ARID3AQ99856 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC17.19■□□□□ 0.34
ARID3AQ99856 AC092127.1-201ENST00000567093 3455 ntBASIC17.19■□□□□ 0.34
ARID3AQ99856 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ARID3AQ99856 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ARID3AQ99856 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ARID3AQ99856 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ARID3AQ99856 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.18■□□□□ 0.34
ARID3AQ99856 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC17.18■□□□□ 0.34
ARID3AQ99856 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ARID3AQ99856 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
ARID3AQ99856 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ARID3AQ99856 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ARID3AQ99856 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ARID3AQ99856 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ARID3AQ99856 AC004987.2-201ENST00000395959 1148 ntBASIC17.18■□□□□ 0.34
ARID3AQ99856 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
ARID3AQ99856 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.18■□□□□ 0.34
ARID3AQ99856 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.18■□□□□ 0.34
ARID3AQ99856 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.18■□□□□ 0.34
ARID3AQ99856 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.18■□□□□ 0.34
ARID3AQ99856 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.18■□□□□ 0.34
ARID3AQ99856 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ARID3AQ99856 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ARID3AQ99856 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.18■□□□□ 0.34
ARID3AQ99856 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
ARID3AQ99856 AC026979.3-201ENST00000607315 403 ntBASIC17.18■□□□□ 0.34
ARID3AQ99856 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.18■□□□□ 0.34
ARID3AQ99856 AC105206.1-202ENST00000314927 2368 ntBASIC17.18■□□□□ 0.34
ARID3AQ99856 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ARID3AQ99856 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ARID3AQ99856 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms