Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 IQSEC3P1-201ENST00000538799 536 ntBASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 AC046158.3-201ENST00000624947 2558 ntBASIC17.19■□□□□ 0.34
CDK5RAP2Q96SN8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 AC026316.1-201ENST00000398900 414 ntBASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 RN7SL665P-201ENST00000578793 300 ntBASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 AP003419.4-201ENST00000616071 517 ntBASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 AC023824.1-201ENST00000562945 2975 ntBASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 AL512430.1-201ENST00000392575 860 ntBASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 KRT8P1-201ENST00000557533 1207 ntBASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 NPM1P43-201ENST00000558669 786 ntBASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 RN7SL555P-201ENST00000584742 339 ntBASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 AC005632.3-201ENST00000605544 308 ntBASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 AC242376.2-201ENST00000619355 883 ntBASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.18■□□□□ 0.34
CDK5RAP2Q96SN8 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 AC090505.1-201ENST00000430515 1834 ntBASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 AP000356.3-201ENST00000382243 753 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms