Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRAMP1Q96RY5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 RN7SL470P-201ENST00000583069 259 ntBASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRAMP1Q96RY5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 AP002353.1-201ENST00000528257 1599 ntBASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 AL157792.1-201ENST00000488281 530 ntBASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 AC005041.3-201ENST00000606287 649 ntBASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.96■□□□□ 0.47
CRAMP1Q96RY5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.46
CRAMP1Q96RY5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CRAMP1Q96RY5 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CRAMP1Q96RY5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CRAMP1Q96RY5 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CRAMP1Q96RY5 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CRAMP1Q96RY5 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CRAMP1Q96RY5 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.95■□□□□ 0.46
CRAMP1Q96RY5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CRAMP1Q96RY5 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CRAMP1Q96RY5 BAK1P1-201ENST00000317045 636 ntBASIC17.95■□□□□ 0.46
CRAMP1Q96RY5 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.95■□□□□ 0.46
CRAMP1Q96RY5 ALG1L6P-201ENST00000515248 758 ntBASIC17.95■□□□□ 0.46
CRAMP1Q96RY5 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.95■□□□□ 0.46
CRAMP1Q96RY5 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms