Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 RN7SKP214-201ENST00000364208 315 ntBASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 AC012441.2-201ENST00000444843 739 ntBASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 AL353637.1-201ENST00000451571 732 ntBASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 HLA-J-204ENST00000495278 958 ntBASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 PRKXP1-201ENST00000561423 1122 ntBASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 AC020910.5-201ENST00000623668 1865 ntBASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 AC006486.2-201ENST00000624246 2199 ntBASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 VDAC1P1-201ENST00000439229 848 ntBASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 AC234782.1-201ENST00000451950 919 ntBASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 AC009779.1-201ENST00000551138 283 ntBASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNGAP1Q96PV0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 MROH4P-201ENST00000431302 1578 ntBASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 AL109954.1-202ENST00000564051 2148 ntBASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNGAP1Q96PV0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms