Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.51■□□□□ 0.07
IFT43Q96FT9 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 AL359711.2-201ENST00000563105 872 ntBASIC15.51■□□□□ 0.07
IFT43Q96FT9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.51■□□□□ 0.07
IFT43Q96FT9 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
IFT43Q96FT9 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.51■□□□□ 0.07
IFT43Q96FT9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.51■□□□□ 0.07
IFT43Q96FT9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
IFT43Q96FT9 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.51■□□□□ 0.07
IFT43Q96FT9 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 AC007686.3-201ENST00000619017 3487 ntBASIC15.51■□□□□ 0.07
IFT43Q96FT9 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 KRT223P-202ENST00000449164 1292 ntBASIC15.5■□□□□ 0.07
IFT43Q96FT9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 SLC25A47P1-201ENST00000531577 414 ntBASIC15.5■□□□□ 0.07
IFT43Q96FT9 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 MIR5189-201ENST00000577370 114 ntBASIC15.5■□□□□ 0.07
IFT43Q96FT9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 AL022328.1-201ENST00000610050 478 ntBASIC15.5■□□□□ 0.07
IFT43Q96FT9 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 BX539320.1-201ENST00000623759 877 ntBASIC15.5■□□□□ 0.07
IFT43Q96FT9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.5■□□□□ 0.07
IFT43Q96FT9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 AC107918.4-201ENST00000641966 3141 ntBASIC15.5■□□□□ 0.07
IFT43Q96FT9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFT43Q96FT9 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
IFT43Q96FT9 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFT43Q96FT9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFT43Q96FT9 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFT43Q96FT9 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
IFT43Q96FT9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IFT43Q96FT9 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IFT43Q96FT9 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IFT43Q96FT9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.49■□□□□ 0.07
IFT43Q96FT9 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFT43Q96FT9 AC013726.1-201ENST00000563747 2285 ntBASIC15.49■□□□□ 0.07
IFT43Q96FT9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFT43Q96FT9 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IFT43Q96FT9 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFT43Q96FT9 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.49■□□□□ 0.07
IFT43Q96FT9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFT43Q96FT9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.49■□□□□ 0.07
IFT43Q96FT9 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.49■□□□□ 0.07
IFT43Q96FT9 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IFT43Q96FT9 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.49■□□□□ 0.07
IFT43Q96FT9 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.49■□□□□ 0.07
IFT43Q96FT9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
IFT43Q96FT9 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFT43Q96FT9 AC104989.1-201ENST00000519711 778 ntBASIC15.49■□□□□ 0.07
IFT43Q96FT9 AP001582.1-201ENST00000525856 295 ntBASIC15.49■□□□□ 0.07
IFT43Q96FT9 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.49■□□□□ 0.07
IFT43Q96FT9 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.49■□□□□ 0.07
IFT43Q96FT9 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.49■□□□□ 0.07
IFT43Q96FT9 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms