Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 AP005117.1-202ENST00000581724 1908 ntBASIC17.16■□□□□ 0.34
CDCA5Q96FF9 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 HMGB1P24-201ENST00000611897 328 ntBASIC17.16■□□□□ 0.34
CDCA5Q96FF9 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 MRPL37P1-201ENST00000592451 1337 ntBASIC17.16■□□□□ 0.34
CDCA5Q96FF9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 AC006372.4-201ENST00000624122 1543 ntBASIC17.16■□□□□ 0.34
CDCA5Q96FF9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 ACTBP7-201ENST00000418351 1124 ntBASIC17.15■□□□□ 0.34
CDCA5Q96FF9 RGS5-216ENST00000449680 788 ntTSL 3 BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 AL135901.1-201ENST00000451812 333 ntBASIC17.15■□□□□ 0.34
CDCA5Q96FF9 AC244197.1-201ENST00000456494 951 ntBASIC17.15■□□□□ 0.34
CDCA5Q96FF9 RN7SL494P-201ENST00000461517 304 ntBASIC17.15■□□□□ 0.34
CDCA5Q96FF9 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 AC226150.1-201ENST00000544259 466 ntBASIC17.15■□□□□ 0.34
CDCA5Q96FF9 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 CTBP2P8-201ENST00000422584 1330 ntBASIC17.15■□□□□ 0.34
CDCA5Q96FF9 TEKT4P2-202ENST00000559466 1312 ntBASIC17.15■□□□□ 0.34
CDCA5Q96FF9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDCA5Q96FF9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.14■□□□□ 0.34
CDCA5Q96FF9 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.14■□□□□ 0.34
CDCA5Q96FF9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CDCA5Q96FF9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CDCA5Q96FF9 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.14■□□□□ 0.34
CDCA5Q96FF9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 ST13P19-201ENST00000442505 1124 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms