Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 NUS1P2-201ENST00000417358 873 ntBASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 AK4P3-201ENST00000418260 669 ntBASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 LAGE3P1-201ENST00000425356 484 ntBASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 AL139010.1-201ENST00000454878 894 ntBASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 DUX4L26-201ENST00000489078 1255 ntBASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 GOLGA8IP-202ENST00000611635 2100 ntBASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 PID1-202ENST00000392054 2745 ntTSL 2 BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
CHCHD1Q96BP2 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 AGAP10P-201ENST00000454844 2418 ntBASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 GOLGA2P5-201ENST00000266746 2395 ntBASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 LINC00265-3P-201ENST00000447588 903 ntBASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 IGHV3-65-201ENST00000523210 341 ntBASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 AC215219.1-201ENST00000400706 1817 ntBASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
CHCHD1Q96BP2 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC10.9□□□□□ -0.67
CHCHD1Q96BP2 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CHCHD1Q96BP2 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CHCHD1Q96BP2 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms