Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC093214.1-201ENST00000511688 1107 ntBASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 AL390955.2-201ENST00000603032 514 ntBASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 DMBT1P1-203ENST00000636837 4628 ntBASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 MBLAC2-202ENST00000514906 1936 ntBASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 AC104457.1-201ENST00000401024 814 ntBASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 KRT18P43-201ENST00000469825 1281 ntBASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 AC009407.1-201ENST00000568958 598 ntBASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 AC005498.2-205ENST00000593218 784 ntBASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 AC004461.2-201ENST00000629517 803 ntBASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms