Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CCER1Q8TC90 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC22.4■■□□□ 1.18
CCER1Q8TC90 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCER1Q8TC90 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCER1Q8TC90 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
CCER1Q8TC90 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
CCER1Q8TC90 RARRES2P5-201ENST00000564013 466 ntBASIC22.4■■□□□ 1.18
CCER1Q8TC90 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC22.4■■□□□ 1.18
CCER1Q8TC90 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
CCER1Q8TC90 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC22.4■■□□□ 1.18
CCER1Q8TC90 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCER1Q8TC90 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CCER1Q8TC90 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCER1Q8TC90 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCER1Q8TC90 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CCER1Q8TC90 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC22.4■■□□□ 1.18
CCER1Q8TC90 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC22.4■■□□□ 1.18
CCER1Q8TC90 AC012617.1-204ENST00000586340 2305 ntBASIC22.4■■□□□ 1.18
CCER1Q8TC90 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC22.4■■□□□ 1.18
CCER1Q8TC90 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCER1Q8TC90 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC22.4■■□□□ 1.18
CCER1Q8TC90 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
CCER1Q8TC90 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCER1Q8TC90 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCER1Q8TC90 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC22.39■■□□□ 1.18
CCER1Q8TC90 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCER1Q8TC90 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC22.39■■□□□ 1.18
CCER1Q8TC90 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC22.39■■□□□ 1.18
CCER1Q8TC90 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
CCER1Q8TC90 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCER1Q8TC90 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CCER1Q8TC90 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCER1Q8TC90 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
CCER1Q8TC90 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.18
CCER1Q8TC90 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CCER1Q8TC90 AC138969.2-201ENST00000532739 9932 ntBASIC22.39■■□□□ 1.18
CCER1Q8TC90 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
CCER1Q8TC90 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCER1Q8TC90 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCER1Q8TC90 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CCER1Q8TC90 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCER1Q8TC90 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC22.39■■□□□ 1.17
CCER1Q8TC90 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC22.39■■□□□ 1.17
CCER1Q8TC90 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC22.39■■□□□ 1.17
CCER1Q8TC90 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC22.39■■□□□ 1.17
CCER1Q8TC90 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC22.39■■□□□ 1.17
CCER1Q8TC90 AC023310.3-201ENST00000557027 670 ntBASIC22.39■■□□□ 1.17
CCER1Q8TC90 AC100756.1-201ENST00000562736 682 ntBASIC22.39■■□□□ 1.17
CCER1Q8TC90 AC138749.3-201ENST00000567691 622 ntBASIC22.39■■□□□ 1.17
CCER1Q8TC90 AC116165.1-201ENST00000611806 668 ntBASIC22.39■■□□□ 1.17
CCER1Q8TC90 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CCER1Q8TC90 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
CCER1Q8TC90 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCER1Q8TC90 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCER1Q8TC90 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCER1Q8TC90 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCER1Q8TC90 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCER1Q8TC90 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCER1Q8TC90 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 MVK-214ENST00000629016 1591 ntTSL 5 BASIC22.38■■□□□ 1.17
CCER1Q8TC90 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CCER1Q8TC90 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC22.38■■□□□ 1.17
CCER1Q8TC90 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
CCER1Q8TC90 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC22.38■■□□□ 1.17
CCER1Q8TC90 RN7SL399P-201ENST00000471648 279 ntBASIC22.38■■□□□ 1.17
CCER1Q8TC90 AC004890.2-204ENST00000481968 304 ntBASIC22.38■■□□□ 1.17
CCER1Q8TC90 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC22.38■■□□□ 1.17
CCER1Q8TC90 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC22.38■■□□□ 1.17
CCER1Q8TC90 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 USP4-203ENST00000415188 1454 ntTSL 3 BASIC22.38■■□□□ 1.17
CCER1Q8TC90 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC22.38■■□□□ 1.17
CCER1Q8TC90 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC22.38■■□□□ 1.17
CCER1Q8TC90 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC22.38■■□□□ 1.17
CCER1Q8TC90 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC22.38■■□□□ 1.17
CCER1Q8TC90 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CCER1Q8TC90 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CCER1Q8TC90 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC22.38■■□□□ 1.17
CCER1Q8TC90 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCER1Q8TC90 AC022144.1-201ENST00000602255 1580 ntBASIC22.38■■□□□ 1.17
CCER1Q8TC90 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCER1Q8TC90 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC22.37■■□□□ 1.17
CCER1Q8TC90 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCER1Q8TC90 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCER1Q8TC90 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCER1Q8TC90 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCER1Q8TC90 AC079781.5-202ENST00000641784 3743 ntBASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms