Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.16■□□□□ 0.02
SYNPOQ8N3V7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SYNPOQ8N3V7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SYNPOQ8N3V7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 CICP13-201ENST00000422015 2789 ntBASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 TNRC18P2-201ENST00000417666 2714 ntBASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 VDAC1P1-201ENST00000439229 848 ntBASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SYNPOQ8N3V7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 AC239868.1-201ENST00000369385 493 ntBASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 RN7SL258P-201ENST00000478664 300 ntBASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 AC116345.2-201ENST00000512837 523 ntBASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 AC008805.1-201ENST00000590892 364 ntBASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 AC011491.1-203ENST00000637688 543 ntBASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 AL109954.1-202ENST00000564051 2148 ntBASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 AC012508.2-201ENST00000567613 1472 ntBASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SYNPOQ8N3V7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms