Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC100756.2-201ENST00000569537 736 ntBASIC10.13□□□□□ -0.79
CSMD3Q7Z407 MIR4472-1-201ENST00000584349 80 ntBASIC10.13□□□□□ -0.79
CSMD3Q7Z407 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 COCH-203ENST00000460581 2688 ntTSL 2 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 AL591122.2-201ENST00000624125 1853 ntBASIC10.13□□□□□ -0.79
CSMD3Q7Z407 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
CSMD3Q7Z407 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 AL590235.1-201ENST00000564650 861 ntBASIC10.12□□□□□ -0.79
CSMD3Q7Z407 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 AC002044.2-201ENST00000624910 970 ntBASIC10.12□□□□□ -0.79
CSMD3Q7Z407 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 AC139712.1-201ENST00000378256 1875 ntBASIC10.12□□□□□ -0.79
CSMD3Q7Z407 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 USP28-214ENST00000545540 3431 ntTSL 2 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 AC012508.2-201ENST00000567613 1472 ntBASIC10.12□□□□□ -0.79
CSMD3Q7Z407 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 KRT18P37-201ENST00000520711 1282 ntBASIC10.12□□□□□ -0.79
CSMD3Q7Z407 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 CYP4F36P-201ENST00000589193 186 ntBASIC10.12□□□□□ -0.79
CSMD3Q7Z407 NAV1-210ENST00000593583 726 ntBASIC10.12□□□□□ -0.79
CSMD3Q7Z407 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 AC021016.3-201ENST00000608367 477 ntBASIC10.12□□□□□ -0.79
CSMD3Q7Z407 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 C18orf15-201ENST00000623680 2534 ntBASIC10.12□□□□□ -0.79
CSMD3Q7Z407 BRD7P5-201ENST00000299197 1822 ntBASIC10.12□□□□□ -0.79
CSMD3Q7Z407 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CSMD3Q7Z407 AC144831.1-201ENST00000573312 2656 ntBASIC10.11□□□□□ -0.79
CSMD3Q7Z407 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 GCOM2-201ENST00000509133 1104 ntBASIC10.11□□□□□ -0.79
CSMD3Q7Z407 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 AL160191.2-201ENST00000603975 601 ntBASIC10.11□□□□□ -0.79
CSMD3Q7Z407 AC011462.4-201ENST00000616866 449 ntBASIC10.11□□□□□ -0.79
CSMD3Q7Z407 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CSMD3Q7Z407 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC10.11□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms