Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 ABR-228ENST00000574437 3196 ntTSL 5 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 AP001282.1-201ENST00000531301 1499 ntBASIC10.03□□□□□ -0.8
SCXQ7RTU7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 AC010327.5-201ENST00000586923 3061 ntBASIC10.03□□□□□ -0.8
SCXQ7RTU7 AC134407.2-201ENST00000625089 1978 ntBASIC10.03□□□□□ -0.8
SCXQ7RTU7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.02□□□□□ -0.8
SCXQ7RTU7 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SCXQ7RTU7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SCXQ7RTU7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SCXQ7RTU7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SCXQ7RTU7 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
SCXQ7RTU7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SCXQ7RTU7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SCXQ7RTU7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC10.02□□□□□ -0.8
SCXQ7RTU7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.02□□□□□ -0.8
SCXQ7RTU7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC10.02□□□□□ -0.8
SCXQ7RTU7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
SCXQ7RTU7 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
SCXQ7RTU7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SCXQ7RTU7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
SCXQ7RTU7 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 FP325330.2-201ENST00000624219 5630 ntBASIC10.02□□□□□ -0.81
SCXQ7RTU7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 AC006449.6-201ENST00000612330 2296 ntBASIC10.02□□□□□ -0.81
SCXQ7RTU7 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 RET-205ENST00000615310 4337 ntTSL 5 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 AC074338.1-201ENST00000416825 156 ntBASIC10.02□□□□□ -0.81
SCXQ7RTU7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 AL442647.2-201ENST00000429864 857 ntBASIC10.02□□□□□ -0.81
SCXQ7RTU7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 AL162726.2-201ENST00000438986 1017 ntBASIC10.02□□□□□ -0.81
SCXQ7RTU7 RPS2P32-201ENST00000439199 892 ntBASIC10.02□□□□□ -0.81
SCXQ7RTU7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 AC022210.1-201ENST00000449856 793 ntBASIC10.02□□□□□ -0.81
SCXQ7RTU7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 AL512343.1-201ENST00000605837 169 ntBASIC10.02□□□□□ -0.81
SCXQ7RTU7 AL391069.4-201ENST00000609583 481 ntBASIC10.02□□□□□ -0.81
SCXQ7RTU7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 LINC01230-201ENST00000625222 3017 ntBASIC10.02□□□□□ -0.81
SCXQ7RTU7 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SCXQ7RTU7 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
SCXQ7RTU7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms