Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTR9Q6PD62 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.75■□□□□ 0.43
CTR9Q6PD62 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTR9Q6PD62 AL009178.2-201ENST00000597278 2719 ntBASIC17.75■□□□□ 0.43
CTR9Q6PD62 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.75■□□□□ 0.43
CTR9Q6PD62 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTR9Q6PD62 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTR9Q6PD62 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 FAM8A2P-201ENST00000528813 1142 ntBASIC17.74■□□□□ 0.43
CTR9Q6PD62 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 MIR4783-201ENST00000580343 82 ntBASIC17.74■□□□□ 0.43
CTR9Q6PD62 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 CICP23-201ENST00000605013 2741 ntBASIC17.74■□□□□ 0.43
CTR9Q6PD62 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTR9Q6PD62 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CTR9Q6PD62 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 AJ011931.1-201ENST00000618749 2492 ntBASIC17.73■□□□□ 0.43
CTR9Q6PD62 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 AL136301.1-201ENST00000615830 422 ntBASIC17.73■□□□□ 0.43
CTR9Q6PD62 AL008638.5-201ENST00000623814 1298 ntBASIC17.73■□□□□ 0.43
CTR9Q6PD62 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 LINC01101-201ENST00000622953 1884 ntBASIC17.73■□□□□ 0.43
CTR9Q6PD62 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CTR9Q6PD62 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTR9Q6PD62 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTR9Q6PD62 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.72■□□□□ 0.43
CTR9Q6PD62 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms