Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 AC090164.2-201ENST00000611487 516 ntBASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 AC091951.1-201ENST00000512854 2465 ntBASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 LINC00528-201ENST00000600723 2160 ntBASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.97■□□□□ 0.15
CTC1Q2NKJ3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 CLUHP2-201ENST00000426660 1303 ntBASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 AL627389.1-201ENST00000413508 1182 ntBASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 ISCA2P1-201ENST00000425548 448 ntBASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 MESTP3-201ENST00000503460 968 ntBASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 RTN3P1-201ENST00000536295 711 ntBASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 AC135983.4-201ENST00000564116 1262 ntBASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 AL136295.7-201ENST00000619226 1200 ntBASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CTC1Q2NKJ3 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CTC1Q2NKJ3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CTC1Q2NKJ3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CTC1Q2NKJ3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CTC1Q2NKJ3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CTC1Q2NKJ3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CTC1Q2NKJ3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.96■□□□□ 0.14
CTC1Q2NKJ3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CTC1Q2NKJ3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.96■□□□□ 0.14
CTC1Q2NKJ3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 AC087481.3-201ENST00000602886 1894 ntBASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 AC104581.4-201ENST00000623126 3052 ntBASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 RN7SKP214-201ENST00000364208 315 ntBASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 RPL13AP19-201ENST00000434320 584 ntBASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CTC1Q2NKJ3 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms