Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CCNA1P78396 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCNA1P78396 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.87■□□□□ 0.29
CCNA1P78396 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.86■□□□□ 0.29
CCNA1P78396 AC007292.2-201ENST00000593524 1812 ntBASIC16.86■□□□□ 0.29
CCNA1P78396 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CCNA1P78396 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCNA1P78396 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.86■□□□□ 0.29
CCNA1P78396 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCNA1P78396 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCNA1P78396 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCNA1P78396 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCNA1P78396 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCNA1P78396 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCNA1P78396 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCNA1P78396 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.86■□□□□ 0.29
CCNA1P78396 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCNA1P78396 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CCNA1P78396 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.86■□□□□ 0.29
CCNA1P78396 AL583805.1-201ENST00000391389 531 ntBASIC16.86■□□□□ 0.29
CCNA1P78396 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.86■□□□□ 0.29
CCNA1P78396 TSPY25P-201ENST00000429463 745 ntBASIC16.86■□□□□ 0.29
CCNA1P78396 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.86■□□□□ 0.29
CCNA1P78396 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.86■□□□□ 0.29
CCNA1P78396 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.86■□□□□ 0.29
CCNA1P78396 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.86■□□□□ 0.29
CCNA1P78396 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.86■□□□□ 0.29
CCNA1P78396 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.86■□□□□ 0.29
CCNA1P78396 AC005632.3-201ENST00000605544 308 ntBASIC16.86■□□□□ 0.29
CCNA1P78396 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CCNA1P78396 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.86■□□□□ 0.29
CCNA1P78396 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCNA1P78396 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCNA1P78396 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCNA1P78396 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCNA1P78396 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.86■□□□□ 0.29
CCNA1P78396 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCNA1P78396 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCNA1P78396 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.86■□□□□ 0.29
CCNA1P78396 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.86■□□□□ 0.29
CCNA1P78396 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCNA1P78396 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCNA1P78396 AC026691.1-201ENST00000602502 2017 ntBASIC16.86■□□□□ 0.29
CCNA1P78396 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.86■□□□□ 0.29
CCNA1P78396 AC126365.1-201ENST00000578585 1514 ntBASIC16.86■□□□□ 0.29
CCNA1P78396 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCNA1P78396 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCNA1P78396 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCNA1P78396 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.85■□□□□ 0.29
CCNA1P78396 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCNA1P78396 LINC01165-201ENST00000445190 1623 ntBASIC16.85■□□□□ 0.29
CCNA1P78396 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.85■□□□□ 0.29
CCNA1P78396 AC018629.1-201ENST00000623381 1736 ntBASIC16.85■□□□□ 0.29
CCNA1P78396 AC015909.3-201ENST00000572855 1794 ntBASIC16.85■□□□□ 0.29
CCNA1P78396 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCNA1P78396 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCNA1P78396 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCNA1P78396 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.85■□□□□ 0.29
CCNA1P78396 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.85■□□□□ 0.29
CCNA1P78396 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCNA1P78396 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.85■□□□□ 0.29
CCNA1P78396 AC138894.2-201ENST00000602838 371 ntBASIC16.85■□□□□ 0.29
CCNA1P78396 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.85■□□□□ 0.29
CCNA1P78396 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
CCNA1P78396 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCNA1P78396 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCNA1P78396 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCNA1P78396 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.85■□□□□ 0.29
CCNA1P78396 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCNA1P78396 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCNA1P78396 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.85■□□□□ 0.29
CCNA1P78396 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.85■□□□□ 0.29
CCNA1P78396 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCNA1P78396 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CCNA1P78396 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCNA1P78396 AL365203.3-201ENST00000609742 2057 ntBASIC16.84■□□□□ 0.29
CCNA1P78396 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CCNA1P78396 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNA1P78396 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNA1P78396 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 AC067930.6-201ENST00000623257 4947 ntBASIC16.84■□□□□ 0.29
CCNA1P78396 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CCNA1P78396 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.84■□□□□ 0.29
CCNA1P78396 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms