Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CASP6P55212 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CASP6P55212 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CASP6P55212 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.52□□□□□ -0.25
CASP6P55212 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CASP6P55212 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CASP6P55212 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.52□□□□□ -0.25
CASP6P55212 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CASP6P55212 EIF3FP3-201ENST00000434851 1086 ntBASIC13.52□□□□□ -0.25
CASP6P55212 MPRIPP1-201ENST00000452433 1089 ntBASIC13.52□□□□□ -0.25
CASP6P55212 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.52□□□□□ -0.25
CASP6P55212 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CASP6P55212 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.52□□□□□ -0.25
CASP6P55212 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
CASP6P55212 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CASP6P55212 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CASP6P55212 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.52□□□□□ -0.25
CASP6P55212 KRT8P19-201ENST00000551916 1455 ntBASIC13.52□□□□□ -0.25
CASP6P55212 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CASP6P55212 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.52□□□□□ -0.25
CASP6P55212 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CASP6P55212 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
CASP6P55212 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CASP6P55212 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CASP6P55212 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CASP6P55212 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CASP6P55212 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CASP6P55212 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.52□□□□□ -0.25
CASP6P55212 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
CASP6P55212 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CASP6P55212 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CASP6P55212 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CASP6P55212 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CASP6P55212 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CASP6P55212 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CASP6P55212 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 AL009178.2-201ENST00000597278 2719 ntBASIC13.51□□□□□ -0.25
CASP6P55212 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.51□□□□□ -0.25
CASP6P55212 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
CASP6P55212 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.51□□□□□ -0.25
CASP6P55212 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.51□□□□□ -0.25
CASP6P55212 AC022188.1-201ENST00000620960 1664 ntBASIC13.51□□□□□ -0.25
CASP6P55212 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.51□□□□□ -0.25
CASP6P55212 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CASP6P55212 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.51□□□□□ -0.25
CASP6P55212 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.51□□□□□ -0.25
CASP6P55212 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.51□□□□□ -0.25
CASP6P55212 GHSR-202ENST00000427970 912 ntBASIC13.51□□□□□ -0.25
CASP6P55212 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.51□□□□□ -0.25
CASP6P55212 SPTLC1P5-201ENST00000450718 252 ntBASIC13.51□□□□□ -0.25
CASP6P55212 TMEM198B-204ENST00000484016 896 ntBASIC13.51□□□□□ -0.25
CASP6P55212 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.51□□□□□ -0.25
CASP6P55212 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.51□□□□□ -0.25
CASP6P55212 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.51□□□□□ -0.25
CASP6P55212 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.51□□□□□ -0.25
CASP6P55212 AC106820.3-201ENST00000561653 397 ntBASIC13.51□□□□□ -0.25
CASP6P55212 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.51□□□□□ -0.25
CASP6P55212 AC013355.1-201ENST00000562625 723 ntBASIC13.51□□□□□ -0.25
CASP6P55212 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.51□□□□□ -0.25
CASP6P55212 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.51□□□□□ -0.25
CASP6P55212 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.51□□□□□ -0.25
CASP6P55212 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.51□□□□□ -0.25
CASP6P55212 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.51□□□□□ -0.25
CASP6P55212 AC138466.3-201ENST00000619983 221 ntBASIC13.51□□□□□ -0.25
CASP6P55212 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
CASP6P55212 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.51□□□□□ -0.25
CASP6P55212 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.51□□□□□ -0.25
CASP6P55212 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.51□□□□□ -0.25
CASP6P55212 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
CASP6P55212 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.51□□□□□ -0.25
CASP6P55212 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.51□□□□□ -0.25
CASP6P55212 LINC02447-202ENST00000501888 2146 ntBASIC13.51□□□□□ -0.25
CASP6P55212 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CASP6P55212 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.51□□□□□ -0.25
CASP6P55212 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms