Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14□□□□□ -0.17
PSMD4P55036 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14□□□□□ -0.17
PSMD4P55036 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14□□□□□ -0.17
PSMD4P55036 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14□□□□□ -0.17
PSMD4P55036 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14□□□□□ -0.17
PSMD4P55036 AC068587.3-201ENST00000526613 355 ntBASIC14□□□□□ -0.17
PSMD4P55036 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14□□□□□ -0.17
PSMD4P55036 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14□□□□□ -0.17
PSMD4P55036 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14□□□□□ -0.17
PSMD4P55036 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14□□□□□ -0.17
PSMD4P55036 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
PSMD4P55036 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
PSMD4P55036 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PSMD4P55036 CICP24-201ENST00000605464 2705 ntBASIC14□□□□□ -0.17
PSMD4P55036 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14□□□□□ -0.17
PSMD4P55036 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PSMD4P55036 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14□□□□□ -0.17
PSMD4P55036 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PSMD4P55036 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14□□□□□ -0.17
PSMD4P55036 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PSMD4P55036 PEG13-201ENST00000631594 5667 ntBASIC14□□□□□ -0.17
PSMD4P55036 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PSMD4P55036 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14□□□□□ -0.17
PSMD4P55036 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PSMD4P55036 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PSMD4P55036 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.99□□□□□ -0.17
PSMD4P55036 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.99□□□□□ -0.17
PSMD4P55036 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.99□□□□□ -0.17
PSMD4P55036 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.99□□□□□ -0.17
PSMD4P55036 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.99□□□□□ -0.17
PSMD4P55036 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.99□□□□□ -0.17
PSMD4P55036 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.99□□□□□ -0.17
PSMD4P55036 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.99□□□□□ -0.17
PSMD4P55036 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.99□□□□□ -0.17
PSMD4P55036 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
PSMD4P55036 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.99□□□□□ -0.17
PSMD4P55036 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.99□□□□□ -0.17
PSMD4P55036 AC012441.1-201ENST00000446669 685 ntBASIC13.99□□□□□ -0.17
PSMD4P55036 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.99□□□□□ -0.17
PSMD4P55036 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.99□□□□□ -0.17
PSMD4P55036 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.99□□□□□ -0.17
PSMD4P55036 AL596325.1-201ENST00000563991 1082 ntBASIC13.99□□□□□ -0.17
PSMD4P55036 DUX4L47-201ENST00000566374 394 ntBASIC13.99□□□□□ -0.17
PSMD4P55036 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
PSMD4P55036 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.99□□□□□ -0.17
PSMD4P55036 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.99□□□□□ -0.17
PSMD4P55036 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.99□□□□□ -0.17
PSMD4P55036 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.99□□□□□ -0.17
PSMD4P55036 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.99□□□□□ -0.17
PSMD4P55036 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.99□□□□□ -0.17
PSMD4P55036 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.99□□□□□ -0.17
PSMD4P55036 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
PSMD4P55036 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PSMD4P55036 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PSMD4P55036 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.99□□□□□ -0.17
PSMD4P55036 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
PSMD4P55036 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
PSMD4P55036 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.98□□□□□ -0.17
PSMD4P55036 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PSMD4P55036 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PSMD4P55036 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.98□□□□□ -0.17
PSMD4P55036 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.98□□□□□ -0.17
PSMD4P55036 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
PSMD4P55036 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
PSMD4P55036 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms