Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.93□□□□□ -0.34
HCFC1P51610 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.93□□□□□ -0.34
HCFC1P51610 AL805961.1-201ENST00000642026 753 ntBASIC12.93□□□□□ -0.34
HCFC1P51610 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
HCFC1P51610 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.93□□□□□ -0.34
HCFC1P51610 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.93□□□□□ -0.34
HCFC1P51610 TSPY26P-202ENST00000565928 3884 ntBASIC12.93□□□□□ -0.34
HCFC1P51610 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HCFC1P51610 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 AC020658.6-201ENST00000623564 1870 ntBASIC12.93□□□□□ -0.34
HCFC1P51610 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
HCFC1P51610 KRT8P31-201ENST00000504812 1408 ntBASIC12.93□□□□□ -0.34
HCFC1P51610 NFIC-211ENST00000641145 8399 ntBASIC12.93□□□□□ -0.34
HCFC1P51610 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HCFC1P51610 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.93□□□□□ -0.34
HCFC1P51610 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 AP000356.3-201ENST00000382243 753 ntBASIC12.93□□□□□ -0.34
HCFC1P51610 AP000358.1-201ENST00000456260 156 ntBASIC12.93□□□□□ -0.34
HCFC1P51610 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.93□□□□□ -0.34
HCFC1P51610 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.93□□□□□ -0.34
HCFC1P51610 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.93□□□□□ -0.34
HCFC1P51610 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.93□□□□□ -0.34
HCFC1P51610 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.93□□□□□ -0.34
HCFC1P51610 RBM8B-201ENST00000555532 525 ntBASIC12.93□□□□□ -0.34
HCFC1P51610 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC12.93□□□□□ -0.34
HCFC1P51610 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.93□□□□□ -0.34
HCFC1P51610 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HCFC1P51610 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.93□□□□□ -0.34
HCFC1P51610 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.92□□□□□ -0.34
HCFC1P51610 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.92□□□□□ -0.34
HCFC1P51610 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 AC023157.3-201ENST00000619086 2088 ntBASIC12.92□□□□□ -0.34
HCFC1P51610 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.92□□□□□ -0.34
HCFC1P51610 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
HCFC1P51610 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.92□□□□□ -0.34
HCFC1P51610 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.92□□□□□ -0.34
HCFC1P51610 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HCFC1P51610 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.92□□□□□ -0.34
HCFC1P51610 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.92□□□□□ -0.34
HCFC1P51610 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.92□□□□□ -0.34
HCFC1P51610 DUTP3-201ENST00000450025 415 ntBASIC12.92□□□□□ -0.34
HCFC1P51610 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.92□□□□□ -0.34
HCFC1P51610 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.92□□□□□ -0.34
HCFC1P51610 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.92□□□□□ -0.34
HCFC1P51610 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.92□□□□□ -0.34
HCFC1P51610 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
HCFC1P51610 AC092171.5-201ENST00000608012 942 ntBASIC12.92□□□□□ -0.34
HCFC1P51610 AC242376.2-201ENST00000619355 883 ntBASIC12.92□□□□□ -0.34
HCFC1P51610 AC023090.2-201ENST00000625182 2110 ntBASIC12.92□□□□□ -0.34
HCFC1P51610 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.92□□□□□ -0.34
HCFC1P51610 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.92□□□□□ -0.34
HCFC1P51610 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HCFC1P51610 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.92□□□□□ -0.34
HCFC1P51610 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HCFC1P51610 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.92□□□□□ -0.34
HCFC1P51610 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.92□□□□□ -0.34
HCFC1P51610 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.92□□□□□ -0.34
HCFC1P51610 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.91□□□□□ -0.34
HCFC1P51610 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
HCFC1P51610 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.91□□□□□ -0.34
HCFC1P51610 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms