Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
KNTC1P50748 PHBP15-201ENST00000574228 665 ntBASIC14.16□□□□□ -0.14
KNTC1P50748 AC005618.3-201ENST00000624928 458 ntBASIC14.16□□□□□ -0.14
KNTC1P50748 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KNTC1P50748 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KNTC1P50748 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KNTC1P50748 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.16□□□□□ -0.14
KNTC1P50748 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KNTC1P50748 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KNTC1P50748 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KNTC1P50748 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KNTC1P50748 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KNTC1P50748 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KNTC1P50748 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KNTC1P50748 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.16□□□□□ -0.14
KNTC1P50748 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.16□□□□□ -0.14
KNTC1P50748 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KNTC1P50748 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KNTC1P50748 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KNTC1P50748 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.16□□□□□ -0.14
KNTC1P50748 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
KNTC1P50748 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KNTC1P50748 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KNTC1P50748 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
KNTC1P50748 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.15□□□□□ -0.14
KNTC1P50748 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 AL157407.1-201ENST00000435784 904 ntBASIC14.15□□□□□ -0.14
KNTC1P50748 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.15□□□□□ -0.14
KNTC1P50748 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.15□□□□□ -0.14
KNTC1P50748 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.15□□□□□ -0.14
KNTC1P50748 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.15□□□□□ -0.14
KNTC1P50748 MIR4649-201ENST00000582839 64 ntBASIC14.15□□□□□ -0.14
KNTC1P50748 AC138466.5-201ENST00000624002 808 ntBASIC14.15□□□□□ -0.14
KNTC1P50748 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
KNTC1P50748 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
KNTC1P50748 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
KNTC1P50748 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
KNTC1P50748 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.15□□□□□ -0.14
KNTC1P50748 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
KNTC1P50748 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 MIR557-201ENST00000385239 98 ntBASIC14.15□□□□□ -0.14
KNTC1P50748 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.15□□□□□ -0.14
KNTC1P50748 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.15□□□□□ -0.14
KNTC1P50748 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
KNTC1P50748 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.15□□□□□ -0.14
KNTC1P50748 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
KNTC1P50748 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.15□□□□□ -0.14
KNTC1P50748 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.15□□□□□ -0.14
KNTC1P50748 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.15□□□□□ -0.14
KNTC1P50748 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
KNTC1P50748 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
KNTC1P50748 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.15□□□□□ -0.14
KNTC1P50748 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
KNTC1P50748 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.15□□□□□ -0.14
KNTC1P50748 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
KNTC1P50748 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC14.15□□□□□ -0.14
KNTC1P50748 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KNTC1P50748 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
KNTC1P50748 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KNTC1P50748 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.14□□□□□ -0.15
KNTC1P50748 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KNTC1P50748 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KNTC1P50748 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.14□□□□□ -0.15
KNTC1P50748 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KNTC1P50748 AC239868.1-201ENST00000369385 493 ntBASIC14.14□□□□□ -0.15
KNTC1P50748 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC14.14□□□□□ -0.15
KNTC1P50748 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KNTC1P50748 NDUFS6P1-201ENST00000485187 316 ntBASIC14.14□□□□□ -0.15
KNTC1P50748 AL157792.1-201ENST00000488281 530 ntBASIC14.14□□□□□ -0.15
KNTC1P50748 MIR3677-201ENST00000578964 60 ntBASIC14.14□□□□□ -0.15
KNTC1P50748 MIR3188-201ENST00000583494 85 ntBASIC14.14□□□□□ -0.15
KNTC1P50748 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.14□□□□□ -0.15
KNTC1P50748 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC14.14□□□□□ -0.15
KNTC1P50748 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms