Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.7□□□□□ -0.22
CENPAP49450 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
CENPAP49450 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.7□□□□□ -0.22
CENPAP49450 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
CENPAP49450 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CENPAP49450 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.7□□□□□ -0.22
CENPAP49450 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 AP001160.2-201ENST00000596071 487 ntBASIC13.7□□□□□ -0.22
CENPAP49450 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.7□□□□□ -0.22
CENPAP49450 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CENPAP49450 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.7□□□□□ -0.22
CENPAP49450 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CENPAP49450 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
CENPAP49450 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
CENPAP49450 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.7□□□□□ -0.22
CENPAP49450 AC100757.3-201ENST00000622361 1406 ntBASIC13.7□□□□□ -0.22
CENPAP49450 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 AC007787.1-201ENST00000588095 1583 ntBASIC13.7□□□□□ -0.22
CENPAP49450 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.7□□□□□ -0.22
CENPAP49450 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CENPAP49450 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.7□□□□□ -0.22
CENPAP49450 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.7□□□□□ -0.22
CENPAP49450 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.7□□□□□ -0.22
CENPAP49450 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CENPAP49450 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CENPAP49450 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.69□□□□□ -0.22
CENPAP49450 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.69□□□□□ -0.22
CENPAP49450 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 OR2I1P-208ENST00000641137 4948 ntBASIC13.69□□□□□ -0.22
CENPAP49450 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CENPAP49450 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.69□□□□□ -0.22
CENPAP49450 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.69□□□□□ -0.22
CENPAP49450 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.69□□□□□ -0.22
CENPAP49450 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
CENPAP49450 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CENPAP49450 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.69□□□□□ -0.22
CENPAP49450 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.69□□□□□ -0.22
CENPAP49450 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.69□□□□□ -0.22
CENPAP49450 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.69□□□□□ -0.22
CENPAP49450 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.69□□□□□ -0.22
CENPAP49450 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.69□□□□□ -0.22
CENPAP49450 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.69□□□□□ -0.22
CENPAP49450 ZNF890P-202ENST00000530367 1156 ntBASIC13.69□□□□□ -0.22
CENPAP49450 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.69□□□□□ -0.22
CENPAP49450 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.69□□□□□ -0.22
CENPAP49450 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.69□□□□□ -0.22
CENPAP49450 AC000095.1-201ENST00000603208 874 ntBASIC13.69□□□□□ -0.22
CENPAP49450 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.69□□□□□ -0.22
CENPAP49450 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.69□□□□□ -0.22
CENPAP49450 AL390754.1-201ENST00000619088 582 ntBASIC13.69□□□□□ -0.22
CENPAP49450 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.69□□□□□ -0.22
CENPAP49450 AC004461.2-201ENST00000629517 803 ntBASIC13.69□□□□□ -0.22
CENPAP49450 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CENPAP49450 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.69□□□□□ -0.22
CENPAP49450 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.69□□□□□ -0.22
CENPAP49450 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms