Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC9.8□□□□□ -0.84
PCP4P48539 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 PDYN-203ENST00000540134 2472 ntAPPRIS P1 TSL 4 BASIC9.8□□□□□ -0.84
PCP4P48539 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
PCP4P48539 FPR2-201ENST00000340023 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
PCP4P48539 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
PCP4P48539 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC9.8□□□□□ -0.84
PCP4P48539 PRPS2-202ENST00000380668 2511 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 AL031733.2-201ENST00000451992 2523 ntTSL 2 BASIC9.8□□□□□ -0.84
PCP4P48539 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC9.8□□□□□ -0.84
PCP4P48539 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
PCP4P48539 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC9.8□□□□□ -0.84
PCP4P48539 CTAGE10P-201ENST00000318353 2408 ntBASIC9.8□□□□□ -0.84
PCP4P48539 BGN-201ENST00000331595 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC9.8□□□□□ -0.84
PCP4P48539 PLK4-201ENST00000270861 3841 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 TSPY21P-201ENST00000433481 731 ntBASIC9.8□□□□□ -0.84
PCP4P48539 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC9.8□□□□□ -0.84
PCP4P48539 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC9.8□□□□□ -0.84
PCP4P48539 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC9.8□□□□□ -0.84
PCP4P48539 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 ADGRG1-255ENST00000567835 3741 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 SLC43A3-201ENST00000352187 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC9.8□□□□□ -0.84
PCP4P48539 LINC00662-201ENST00000561521 2480 ntTSL 2 BASIC9.8□□□□□ -0.84
PCP4P48539 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC9.8□□□□□ -0.84
PCP4P48539 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
PCP4P48539 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 SERP1-203ENST00000479209 3934 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
PCP4P48539 AL392083.1-201ENST00000632982 2985 ntBASIC9.8□□□□□ -0.84
PCP4P48539 CALML3-AS1-202ENST00000543008 4531 ntTSL 5 BASIC9.8□□□□□ -0.84
PCP4P48539 TSC22D3-206ENST00000372397 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC9.8□□□□□ -0.84
PCP4P48539 ENO4-201ENST00000341276 2865 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
PCP4P48539 ESR1-207ENST00000440973 6466 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
PCP4P48539 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC9.8□□□□□ -0.84
PCP4P48539 ST3GAL6-201ENST00000265261 3362 ntTSL 2 BASIC9.8□□□□□ -0.84
PCP4P48539 HSPA4-201ENST00000304858 4825 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 CLCN5-203ENST00000376091 3046 ntTSL 2 BASIC9.8□□□□□ -0.84
PCP4P48539 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
PCP4P48539 LOXHD1-207ENST00000441551 6226 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
PCP4P48539 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PCP4P48539 GPR61-207ENST00000618721 2823 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
PCP4P48539 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
PCP4P48539 AC018553.1-201ENST00000616682 1458 ntBASIC9.79□□□□□ -0.84
PCP4P48539 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
PCP4P48539 ZNF429-201ENST00000358491 2233 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
PCP4P48539 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PCP4P48539 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PCP4P48539 SUPT7L-204ENST00000406540 2869 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PCP4P48539 LINC01165-201ENST00000445190 1623 ntBASIC9.79□□□□□ -0.84
PCP4P48539 DCK-204ENST00000504952 2614 ntTSL 3 BASIC9.79□□□□□ -0.84
PCP4P48539 PCYOX1L-207ENST00000514349 2793 ntTSL 2 BASIC9.79□□□□□ -0.84
PCP4P48539 SMAP2-205ENST00000539317 2501 ntTSL 2 BASIC9.79□□□□□ -0.84
PCP4P48539 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC9.79□□□□□ -0.84
PCP4P48539 AL445250.1-201ENST00000641671 2259 ntBASIC9.79□□□□□ -0.84
PCP4P48539 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC9.79□□□□□ -0.84
PCP4P48539 TRUB1-201ENST00000298746 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PCP4P48539 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC9.79□□□□□ -0.84
PCP4P48539 URM1-203ENST00000372853 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PCP4P48539 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
PCP4P48539 PTPA-214ENST00000423100 988 ntTSL 2 BASIC9.79□□□□□ -0.84
PCP4P48539 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC9.79□□□□□ -0.84
PCP4P48539 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC9.79□□□□□ -0.84
PCP4P48539 KRT18P41-201ENST00000518924 1277 ntBASIC9.79□□□□□ -0.84
PCP4P48539 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC9.79□□□□□ -0.84
PCP4P48539 AC010761.1-201ENST00000582718 899 ntTSL 5 BASIC9.79□□□□□ -0.84
PCP4P48539 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
PCP4P48539 AC011551.1-201ENST00000614101 683 ntBASIC9.79□□□□□ -0.84
PCP4P48539 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC9.79□□□□□ -0.84
PCP4P48539 GSTM5-203ENST00000369813 4370 ntTSL 2 BASIC9.79□□□□□ -0.84
PCP4P48539 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
PCP4P48539 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PCP4P48539 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PCP4P48539 FOS-202ENST00000535987 1402 ntTSL 2 BASIC9.79□□□□□ -0.84
PCP4P48539 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC9.79□□□□□ -0.84
PCP4P48539 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
PCP4P48539 SRSF7-201ENST00000313117 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PCP4P48539 C14orf159-223ENST00000522322 2856 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
PCP4P48539 ITIH3-201ENST00000416872 2220 ntTSL 2 BASIC9.79□□□□□ -0.84
PCP4P48539 PIK3R5-218ENST00000611902 4339 ntTSL 5 BASIC9.79□□□□□ -0.84
PCP4P48539 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PCP4P48539 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
PCP4P48539 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC9.79□□□□□ -0.84
PCP4P48539 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC9.79□□□□□ -0.84
PCP4P48539 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC9.79□□□□□ -0.84
PCP4P48539 MORC2-202ENST00000397641 5181 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
PCP4P48539 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
PCP4P48539 TSEN2-204ENST00000415684 2279 ntTSL 5 BASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms