Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 MTHFR-210ENST00000641407 2387 ntBASIC16.04■□□□□ 0.16
SSR1P43307 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SSR1P43307 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.04■□□□□ 0.16
SSR1P43307 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 SPDYE19P-201ENST00000338590 713 ntBASIC16.04■□□□□ 0.16
SSR1P43307 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.04■□□□□ 0.16
SSR1P43307 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.04■□□□□ 0.16
SSR1P43307 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.04■□□□□ 0.16
SSR1P43307 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.04■□□□□ 0.16
SSR1P43307 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.04■□□□□ 0.16
SSR1P43307 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.04■□□□□ 0.16
SSR1P43307 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.04■□□□□ 0.16
SSR1P43307 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.04■□□□□ 0.16
SSR1P43307 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.04■□□□□ 0.16
SSR1P43307 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 AC026748.1-201ENST00000624349 3251 ntBASIC16.04■□□□□ 0.16
SSR1P43307 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
SSR1P43307 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SSR1P43307 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.04■□□□□ 0.16
SSR1P43307 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
SSR1P43307 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.04■□□□□ 0.16
SSR1P43307 AC007787.1-201ENST00000588095 1583 ntBASIC16.04■□□□□ 0.16
SSR1P43307 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SSR1P43307 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.04■□□□□ 0.16
SSR1P43307 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.03■□□□□ 0.16
SSR1P43307 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.03■□□□□ 0.16
SSR1P43307 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SSR1P43307 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC16.03■□□□□ 0.16
SSR1P43307 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
SSR1P43307 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SSR1P43307 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.03■□□□□ 0.16
SSR1P43307 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 LILRP1-201ENST00000444199 1370 ntBASIC16.03■□□□□ 0.16
SSR1P43307 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.03■□□□□ 0.16
SSR1P43307 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.03■□□□□ 0.16
SSR1P43307 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.03■□□□□ 0.16
SSR1P43307 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.03■□□□□ 0.16
SSR1P43307 AC023310.3-201ENST00000557027 670 ntBASIC16.03■□□□□ 0.16
SSR1P43307 AC100756.1-201ENST00000562736 682 ntBASIC16.03■□□□□ 0.16
SSR1P43307 AC138749.3-201ENST00000567691 622 ntBASIC16.03■□□□□ 0.16
SSR1P43307 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.03■□□□□ 0.16
SSR1P43307 AC005498.2-205ENST00000593218 784 ntBASIC16.03■□□□□ 0.16
SSR1P43307 AC116165.1-201ENST00000611806 668 ntBASIC16.03■□□□□ 0.16
SSR1P43307 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.03■□□□□ 0.16
SSR1P43307 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
SSR1P43307 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.03■□□□□ 0.16
SSR1P43307 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.03■□□□□ 0.16
SSR1P43307 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.03■□□□□ 0.16
SSR1P43307 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSR1P43307 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.03■□□□□ 0.16
SSR1P43307 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.03■□□□□ 0.16
SSR1P43307 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SSR1P43307 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.02■□□□□ 0.16
SSR1P43307 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSR1P43307 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SSR1P43307 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SSR1P43307 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSR1P43307 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSR1P43307 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC16.02■□□□□ 0.16
SSR1P43307 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms