Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC10.18□□□□□ -0.78
CXCL5P42830 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC10.18□□□□□ -0.78
CXCL5P42830 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC10.18□□□□□ -0.78
CXCL5P42830 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC10.18□□□□□ -0.78
CXCL5P42830 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC10.18□□□□□ -0.78
CXCL5P42830 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 PIN1-206ENST00000587625 878 ntTSL 2 BASIC10.18□□□□□ -0.78
CXCL5P42830 AC003101.2-201ENST00000612557 442 ntBASIC10.18□□□□□ -0.78
CXCL5P42830 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC10.18□□□□□ -0.78
CXCL5P42830 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC10.18□□□□□ -0.78
CXCL5P42830 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
CXCL5P42830 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
CXCL5P42830 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC10.18□□□□□ -0.78
CXCL5P42830 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC10.18□□□□□ -0.78
CXCL5P42830 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
CXCL5P42830 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC10.18□□□□□ -0.78
CXCL5P42830 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
CXCL5P42830 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC10.18□□□□□ -0.78
CXCL5P42830 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CXCL5P42830 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC10.18□□□□□ -0.78
CXCL5P42830 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC10.18□□□□□ -0.78
CXCL5P42830 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC10.17□□□□□ -0.78
CXCL5P42830 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
CXCL5P42830 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC10.17□□□□□ -0.78
CXCL5P42830 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC10.17□□□□□ -0.78
CXCL5P42830 AC015909.5-201ENST00000624336 2266 ntBASIC10.17□□□□□ -0.78
CXCL5P42830 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CXCL5P42830 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CXCL5P42830 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC10.17□□□□□ -0.78
CXCL5P42830 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CXCL5P42830 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.17□□□□□ -0.78
CXCL5P42830 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC10.17□□□□□ -0.78
CXCL5P42830 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC10.17□□□□□ -0.78
CXCL5P42830 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC10.17□□□□□ -0.78
CXCL5P42830 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC10.17□□□□□ -0.78
CXCL5P42830 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 SAMD11P1-201ENST00000571429 661 ntBASIC10.17□□□□□ -0.78
CXCL5P42830 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC10.17□□□□□ -0.78
CXCL5P42830 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 RN7SL828P-201ENST00000607615 303 ntBASIC10.17□□□□□ -0.78
CXCL5P42830 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC10.17□□□□□ -0.78
CXCL5P42830 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC10.17□□□□□ -0.78
CXCL5P42830 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CXCL5P42830 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC10.17□□□□□ -0.78
CXCL5P42830 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
CXCL5P42830 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC10.17□□□□□ -0.78
CXCL5P42830 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
CXCL5P42830 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC10.17□□□□□ -0.78
CXCL5P42830 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC10.17□□□□□ -0.78
CXCL5P42830 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CXCL5P42830 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC10.17□□□□□ -0.78
CXCL5P42830 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.17□□□□□ -0.78
CXCL5P42830 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms